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Hepatitis C virus RNA levels at week-2 of telaprevir/boceprevir administration are predictive of virological outcome

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Digestive

and

Liver

Disease

j o ur n a l ho me p a g e :w w w . e l s e v i e r . c o m / l o c a t e / d l d

Liver,

Pancreas

and

Biliary

Tract

Hepatitis

C

virus

RNA

levels

at

week-2

of

telaprevir/boceprevir

administration

are

predictive

of

virological

outcome

q

Valeria

Cento

a

,

Daniele

Di

Paolo

b

,

Domenico

Di

Carlo

a

,

Valeria

Micheli

c

,

Monica

Tontodonati

d,e

,

Francesco

De

Leonardis

b

,

Marianna

Aragri

a

,

Francesco

Paolo

Antonucci

a

,

Velia

Chiara

Di

Maio

a

,

Alessandro

Mancon

c

,

Ilaria

Lenci

b

,

Alessandra

Manunta

f

,

Gloria

Taliani

g

,

Antonio

Di

Biagio

h

,

Laura

Ambra

Nicolini

h

,

Lorenzo

Nosotti

i

,

Cesare

Sarrecchia

j

,

Massimo

Siciliano

k

,

Simona

Landonio

l

,

Adriano

Pellicelli

m

,

Adriano

Gasbarrini

k

,

Jacopo

Vecchiet

d

,

Carlo

Federico

Magni

l

,

Sergio

Babudieri

f

,

Maria

Stella

Mura

f

,

Massimo

Andreoni

j

,

Giustino

Parruti

e

,

Giuliano

Rizzardini

l

,

Mario

Angelico

b

,

Carlo

Federico

Perno

a

,

Francesca

Ceccherini-Silberstein

a,∗

aDepartmentofExperimentalMedicineandSurgery,UniversityofRome“TorVergata”,Rome,Italy bHepatologyUnit,UniversityHospitalofRome“TorVergata”,Rome,Italy

cUnitofMicrobiology,HospitalSaccoofMilan,Milan,Italy dInfectiousDiseaseClinic,Chieti,Italy

eInfectiousDiseaseUnit,PescaraGeneralHospital,Pescara,Italy

fInfectiousDiseasesUnit,DepartmentofClinicalandExperimentalMedicine,UniversityofSassari,Italy g“LaSapienza”University,Rome,Italy

hS.MartinoHospital,Genova,Italy

iHepatologyUnit,NationalInstituteofHealth,MigrationandPoverty,Rome,Italy jInfectiousDisease,UniversityHospitalofRome“TorVergata”,Rome,Italy kGastroenterology,CatholicUniversityofRome,Rome,Italy

lDivisionofInfectiousDisease,HospitalSaccoofMilan,Milan,Italy mHepatologyUnit,SanCamilloForlaniniHospital,Rome,Italy

a

r

t

i

c

l

e

i

n

f

o

Articlehistory: Received8July2014 Accepted18November2014 Availableonlinexxx Keywords: Earlyresponse NS3proteaseinhibitors Viralkinetics Virologicalfailure

a

b

s

t

r

a

c

t

Background: Triple therapy with telaprevir/boceprevir+pegylated-interferon+ribavirin can achieve excellentantiviralefficacy,butitcanbeburdenedwithresistancedevelopmentatfailure.

Aims:ToevaluatekineticsofhepatitisCvirus(HCV)RNAdecayandearlyresistancedevelopment,in ordertopromptlyidentifypatientsathighestriskoffailuretofirstgenerationproteaseinhibitors.

Methods: HCV-RNA was prospectively quantified in 158 patients receiving pegylated-interferon+ribavirin+telaprevir (N=114) or+boceprevir (N=44), at early time-points and during perprotocolfollow-up.Drugresistancewascontextuallyevaluatedbypopulationsequencing.

Results:HCV-RNAatweek-2wassignificantlyhigher inpatientsexperiencingvirologicalfailureto triple-therapythaninpatientswithsustainedviralresponse(2.3[1.9–2.8]versus1.2[0.3–1.7]logIU/mL,

p<0.001).A100IU/mLcut-offvalueforweek-2HCV-RNAhadthehighestsensitivity(86%)inpredicting virologicalsuccess.Indeed,23/23(100%)patientswithundetectableHCV-RNAreachedsuccess,versus

26/34(76.5%)patientswithHCV-RNA<100IU/mL,andonly11/31(35.5%)withHCV-RNA>100IU/mL (p<0.001).Furthermore,differentlyfromfailingpatients,noneofthepatientwithundetectableHCV-RNA atweek-2hadbaseline/earlyresistance.

q Thisworkhasbeenpresentedinpartatthe48thAnnualMeetingoftheEuropeanAssociationfortheStudyoftheLiver(EASL),heldinAmsterdam,Netherlands,April24–28, 2013andatTheLiverMeeting®2014AmericanAssociationfortheStudyoftheLiver,November1–5,2013,WashingtonDC,USA.

∗ Correspondingauthorat:DepartmentofExperimentalMedicineandSurgery,UniversityofRomeTorVergata,ViaMontpellier1,Rome00133,Italy.Tel.:+390672596553; fax:+390672596039.

E-mailaddress:[email protected](F.Ceccherini-Silberstein).

http://dx.doi.org/10.1016/j.dld.2014.11.010

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Conclusions:Withtripletherapybasedonfirstgenerationproteaseinhibitors,suboptimalHCV-RNAdecay atweek-2combinedwithearlydetectionofresistancecanhelpidentifyingpatientswithhigherriskof virologicalfailure,thusrequiringaclosermonitoringduringtherapy.

©2014EditriceGastroenterologicaItalianaS.r.l.PublishedbyElsevierLtd.Allrightsreserved.

1. Introduction

AccordingtotheHCV-kineticsmodel,initiallybasedon inter-feron (IFN) monotherapy [1], antiviral treatment of chronic hepatitis C leads toa biphasic decay of plasma HCV-RNA. Ini-tially, treatment actsby blockingviralproduction, determining a veryfastfirstphaseofHCV-RNA declinecharacterizedbythe clearance offreecirculatingvirions.Afterwards,theprogressive clearanceofinfectedcellsdeterminesamuchslowersecondphase ofviraemiadecline.Thismodelwaslaterconfirmedalsoin pegy-lated IFN (pegIFN), pegIFN+ribavirin (RBV) and in treatments includingdirectactingantiviralagents(DAAs),suchastelaprevir (TVR)[2–6].

WithIFNtreatment,thedividinglinebetweenfirstandsecond phasewassetatday2[1],butinthecontextofTVR-treatment,viral dynamicsaremuchmorerapidandtheabovementionedlinemay bemovedbackwards[3].

TVR and boceprevir (BOC), approved by the U.S. Food and DrugAdministration(FDA)andEuropeanMedicinesAgency(EMA) in 2011, are the first-generation protease inhibitors (PIs) cur-rently availablein clinicalpractice.Bothareadministeredusing a response-guided protocol, in which viral decline determines treatment-duration [7–11]. Allguidelines setthe first viraemia check-point at week-4. Nevertheless, given the rapid HCV-dynamicsduringPI-basedtripletherapy,earliertime-pointsmay beadditionallyinformativeonexpectedtreatmentoutcome,and thereforebecomeusefulinclinicalpractice.

Moreover,atypicalfeatureofHCVistheabilitytodevelop/select resistanceassociatedvariants(RAVs)duringtreatment,asa conse-quenceofpotentialnaturalresistanceandlowgeneticbarrierof first-generationPIs[12–14].Virological-failuretoTVRandBOCis indeedassociatedwithRAVsdevelopmentinthevastmajorityof cases[15–18].

WhenRAVsarepresentatbaseline,eitherasmajorviral popula-tionorasminorityvariants,theycouldgreatlyaffectviralresponse totreatment,particularlyinmonotherapy,determininga subop-timal viraldecay andthusfurther increasinginresistance level [14,19–26].Thispointshouldbetakenintoaccounttofully deter-minethekineticsofHCV-RNAdecay.

In the present study, a large heterogeneous population of patients infected with HCV genotype 1 treated with TVR- or BOC-based triple-therapy wasanalyzed, in order toinvestigate HCV-kineticsaccordingtopatients’complexityinreal-lifesettings. ThekineticsofviralresponsewasassessedshortlyafterPI’sstart, andwascorrelatedwithbothclinicaloutcomeandviralgenetic background,focusingonbaseline/earlydetectionofRAVs.Several cut-offscategorizingearlyHCV-RNAdecaywerethenevaluated, inordertoprovideausefultoolforthemonitoringofvirological responsetofirst-generationPIsinclinicalpractice.

2. Methods 2.1. Patients

Chronically HCV genotype 1 infected patients, consecutively seenatseveralItalianclinicalcentresbetweenJanuary2011and August 2013and startingatriple-therapybasedonPegIFN/RBV plusBOCorTVR,wereconsideredforinclusion.Onlypatientswith

available treatment outcome were considered for the analysis. Exclusion criteria were age under 18 years and other chronic liver diseases. Patients who stopped triple-therapy early for any other reasons than virological breakthrough or stopping rules were also excluded. Treatment schedules and stopping rulesfollowedTVR/BOCprescribinginformation[8,9].Thechoice betweenaBOC-orTVR-basedregimenwasattheinvestigator’s discretion.

This study was conducted in accordance with the princi-ples of the Declaration of Helsinki and approved by the local EthicsCommittees.Allenrolledpatientsprovidedwritteninformed consent.

2.2. Patientsmonitoring

FibrosisstagingwasdeterminedusingeitherFibroscan® (Echo-sens,Paris,France),Fibrotest®(Biopredictive,Paris,France)orliver biopsy,andinterpretedbyanexpertpathologist.

HCV-RNA viral load quantification was performed using theCOBASAmpliprep/COBASTaqMan HCV quantitativetest v2.0 (RocheDiagnostics)orAbbottRealTimeHCVassay(Abbott Labo-ratories,AbbottPark,IL,USA)withlowerlimitofdetection(LLOD) of15and12IU/mL,respectively.Inadditiontostandardviraemia check-points[7],HCV-RNAwasalsodeterminedat48h,week-1 andweek-2afterPIstart(TVRorBOC).

Plasmasampleswerecollectedandstoredat−80◦Caftereach

visit.

2.3. NS3-proteasesequencing

Genotypicresistancetest(GRT)onNS3-proteasesequences(aa 1–181)wasperformedbyanhome-madepopulation-sequencing protocol as elsewhere described [12]. Baseline-GRT was per-formedfor110patientsincludedintheanalysis,onthebasisof samples’availability.For39patientswasalsoavailablean addi-tional GRT at early time points, between 48h and week-4 of triple-therapy.

ThefollowingPIRAVswereconsideredintheanalyses:36AGLM, 41R,43ISV,54ASV,55IA,80K,155IKMQT,156GSTV,168AEGNTVY and170AT.

2.4. Statisticalanalysis

Resultsareexpressedasmedianvaluesandinterquartilerange (IQR).ValueswerecomparedusingtheMann–WhitneyU-test.

Sensitivity,specificityandpositivepredictivevalueswere cal-culatedtoevaluatethepredictionofvirological-successinrelation toHCV-RNAvaluesafter48h,2weeksand4weekssincePI-start. CorrelationcoefficientbetweenbaselineHCV-RNAandHCV-RNA at 48h and at week-2 of triple therapy was determinedusing Spearman rankcorrelationtest.AROC curveanalysiswasused todeterminetheoptimalHCV-RNAcut-offfortreatmentoutcome prediction.

Linear logistic regression analysis was used toestimate the associationbetweensustainedviralresponse(SVR)andHCV-RNA valuesatweek-2and week-4since PI-start,stratifiedaccording tothepredictioncut-off.HCV-genotype,gender,age,diagnosisof cirrhosis,null-responsetopreviouspegIFN+RBVadministrations,

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lowbaselineviraemia(≤600,000IU/mL)andpresenceofatleast onebaseline/earlyRAVwereusedaspotentialconfounders.

All the analyses were performed using the statistical open sourceenvironmentR(version3.1.1)andSPSSsoftwarepackage (version19.0)forWindows(SPSSInc.,Chicago,IL).

3. Results

3.1. Studypopulation

Atotalof287patientswereenrolledforaPI-basedtreatment (BOC=79,TVR=208)(Supp.Fig.S1).Outofthese:84(29.3%) pre-maturelyinterruptedtreatment,duetovirological-failure(48/84, 57.1%),adverse events (31/84, 36.9%)or poor adherence (5/84, 6.0%);93/287(32.4%)arestillon-treatment,while110/287patients (38.3%)reachedEndOfTreatment(EOT)withundetectable HCV-RNA.Among theEOT patients, 104(94.5%) reached SVR, while 6 patients showed a relapse after treatment discontinuation (BOC=3,TVR=3).OnlypatientsexperiencingeitheratleastSVR12

(N=104) or virological failure (N=54) were consideredfor the analysis.

TwelveHIV-HCVcoinfectedpatientswereincludedinthestudy population(BOC=2andTVR=10),and9/12reachedSVR(2 TVR-treated coinfected patients resulted partial respondersand the thirdexperiencedarelapseafterTVRdiscontinuation).

Baselinedemographicandvirologicalcharacteristicsofthe158 patientsincludedintheanalysisarereportedinTable1.HCV GT-1bwasthemostrepresentedsubtype(88/158patients [55.7%]), but no statistically significant differences were highlighted betweenGT-1aandGT-1bfortheprevalenceofcirrhosis(56.5% versus 42.0%, p=0.072), baseline HCV-RNA (median [IQR]=6.0 [5.4–6.5]logIU/mL versus 5.6 [5.0–6.4]logIU/mL, p=0.055) and baselineALTvalues(median[IQR]=96[65–140]IU/mLversus88 [64–116]IU/mL,p=0.322).

Overall,18.4%ofpatients werenaïvetoanti-HCV treatment. Amongtreatment-experiencedpatients, themajority were pre-viousnon-responders(83/126,65.9%),and43/126 (34.1%)were previousrelapsers. Baseline lead-in (N=51) 48h (N=67) Baseline PI (N=158) Week 1 (N=44) Week 2 (N=88) Week 4 (N=154) L o gH C V -R N A ( IU /m L ) 1.0 8.0 7.0 6.0 5.0 4.0 3.0 2.0

Fig.1. Box-plotsrepresentingtheoveralldistributionofhepatitisCvirusRNAvalues atbaselineandatearlytimepoints,uptoweek4,oftriple-therapyadministration. IU,internationalunits;PI,proteaseinhibitor.

3.2. EarlyHCV-RNAdecaykineticanditsimpactonthe achievementofarapidviralresponse

Arapidviralresponse(RVR)wasobservedin73/154(47.4%) patientswithavailableHCV-RNAatweek-4(34.9%withBOCand 52.3% with TVR, p=0.053). Out of 73 RVR-patients, 63 (86.3%) reachedthenSVRversus38/81(46.9%)non-RVRpatients(p<0.001). Basedontheavailabilityofsamples,earlytime-pointsafter PI-startwereanalyzedinasubsetofpatients:48hin67patients,and week-2in88patients.TheoveralldistributionofHCV-RNAvalues atearlytime-points,uptoweek-4oftriple-therapyadministration, isreportedinFig.1.

After 48h of PI-administration, the median (IQR) HCV-RNA decay was of −3.1 (−3.4; −2.5)logIU/mL, corresponding to a median (IQR) weekly viraemia decay-slope of −10.8 (−11.8; −8.9)logIU/mLperweek.

After48h,2patientshad alreadyHCV-RNAbelowthelower limitofdetection(TND).BothofthemreachedRVRandthenSVR. Moreover,RVRwasachievedin22/31(71.0%)patientswith48h HCV-RNAdetectablebut<1000IU/mLand12/34(35.3%)patients Table1

Baselineclinicalcharacteristicsofthe158proteaseinhibitortreatedpatientsincludedintheanalysis.

Patientsreceivingboceprevir Patientsreceivingtelaprevir Overall

Patients,N 44 114 158 Males,N(%) 32(72.7) 82(71.9) 114(72.2) HCV-1subtype,N(%) 1a 17(38.6) 52(45.6) 69(43.7) 1b 26(59.1) 62(54.4) 88(55.7) 1g 1(2.3) 0(0.0) 1(0.6)

Age(years),Median(IQR) 54(45–61) 53(48–61) 53(47–61)

PatientswithunfavourableIL-28Bgenotype(CT/TT),N(%)a 26(83.9) 67(81.7) 93(82.3)

TimesinceHCVdiagnosis(years),Median(IQR) 14(8–18) 16(7–20) 15(7–20)

Stageofliverdisease,N(%)

F0–F2 10(22.7) 28(24.6) 38(24.1)

F3 21(47.7) 23(20.2) 44(27.8)

Cirrhosis(F4) 13(29.5) 63(55.3) 76(48.1)

Naivepatients,N(%) 3(6.8) 26(22.8) 29(18.4)

VirologicaloutcometopreviousSOC,N(%)

Non-responder 9(20.5) 8(7.0) 17(10.8)

Null-responder 14(31.8) 25(21.9) 39(24.7)

Partial-responder 8(18.2) 19(16.7) 27(17.1)

Relapse 10(22.7) 33(28.9) 43(27.2)

Unknown 0(0.0) 3(2.6) 3(1.9)

BaselineLead-inHCV-RNA(logIU/mL),Median(IQR) 6(5.5–6.6) 6.1(5.9–6.2)b 6.1(5.6–6.5)

BaselinePIHCV-RNA(logIU/mL),Median(IQR)c 5.1(3.7–5.7) 6(5.5–6.6) 5.8(5.1–6.4)

BaselineALT,Median(IQR) 86(50–117) 92(65–122) 90(64–122)

HCV,hepatitisCvirus;IQR,interquartilerange;SOC,standardofcare;IU,internationalunits;PI,proteaseinhibitor;ALT,alaninetransaminase.

aIL-28Bgenotypewasavailablefor31boceprevir-treatedpatientsandfor82telaprevir-treated.

b A4-weekssensitivitytestwithpeg-interferon+ribavirinwasperformedineightpatientsbeforetelaprevirstart. c HepatitisCvirusRNAvaluebeforeproteaseinhibitorstart.

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Table2

Triple-therapyoutcomeinrelationto48handweek2hepatitisCvirusRNAvalues.

HCV-RNAat48h(IU/mL) p-valuea HCV-RNAatweek2(IU/mL) p-valuea

TND <1000 >1000 TND <100 >100

PatientswithavailableHCV-RNAvalue,N 2 31 34 23 34 31

PatientsexperiencingRVR,N(%)a 2(100) 22(71.0) 12(35.3) 0.004 23(100) 19(55.9) 3(9.7) <0.001

PatientsexperiencingSVR,N(%) 2(100) 25(80.6) 20(58.8) 0.102 23(100) 26(76.5) 11(35.5) <0.001 Patientsexperiencingvirologicalfailure,N(%)b 6(19.4) 14(41.2) 0.102 8(23.5) 20(64.5) <0.001

Virologicalbreakthrough,N(%) – 6(100) 13(92.9) – 6(75.0) 20(100)

Relapse,N(%) – – 1(7.1) – 2(25.0) –

HCV,hepatitisCvirus;TND,targetnotdetected(belowthelowerlimitofdetection);IU,internationalunits;RVR,rapidvirologicresponse;SVR,sustainedvirologicalresponse.

aP-valuewascalculatedbyChiSquaretestfortrend.

with48hHCV-RNA>1000IU/mL(p=0.004)(Table2).The abso-lutevalueofHCV-RNAat48hwasindependentbyHCV-genotype, previousresponsetopegIFN+RBVdual-therapyanddiagnosisof cirrhosis(Fig.2,panelA),aswellasbythetypeofPIused(p=0.905 byMann–Whitneytest,datanotshown).

Atweek-2,viraemia slopecontinuedtodiminishas patients approached undetectability,following aclassicalbiphasic kinet-ics.Indeed,themedian(IQR)HCV-RNAdecaywasof−4.1(−4.9; −3.6)logIU/mLand theweeklyviraemia decay-slope reached a median(IQR)valueof−2.1(−2.4;−1.8)logIU/mLperweek,thus muchslowercomparedtothatestimatedat48h.Atweek-2,31/88 (35.2%) patients still had viraemia >100IU/mL (Table 2): 87.1% (27/31) of them were previousnon-responders,supportingthe significantly slowersecond phase kinetic observed in this cat-egory of subjects versus previousrelapsers or naïve (p=0.002; Fig.2,panelA).Interestingly,only3/31(9.7%)patientswith HCV-RNA>100IU/mLatweek-2experiencedanRVRafterwards,versus 23/23TNDpatients(p<0.001byFisherexacttest)(Table2).

Therefore,earlydeterminationofHCV-RNAat48hand week-2 already allows the identificationof: (a)patients with higher chancesofreachingRVRand(b)patientswithsuboptimal viral-response.NodifferenceswerehighlightedinearlyHCV-RNAlevels followingTVRorBOCadministration.

3.3. ImpactofearlyHCV-RNAdecaykineticontreatment outcome

HCV-RNA valueat week-2 wassignificantly associated with virological-outcome, being lower in patients reaching SVR (median[IQR]HCV-RNA2w=1.2[0.3–1.7])incomparisontothose

experiencing virological-failure (median [IQR] HCV-RNA2w=2.3

[1.9–2.8];p<0.001byMann–WhitneyUtest)(Fig.2,panelB).On thecontrary,HCV-RNAvalueat48hdidnotreachstatistical signif-icance(p=0.139)(Fig.2,panelB).

Inparticular,virological-failurewasneverobservedin23TND patientsatweek-2(4BOCand19TVR),whereasitoccurredin8/34 patients(23.5%)with≤100IU/mL(1BOCand7TVR)andin20/31 patients(64.5%)(7BOCand13TVR)with>100IU/mLatweek-2 (p<0.001byChi2TestforTrend)(Table2).Notably,inour

popula-tion,only1RVRpatientexperiencedvirological-failure,andhehad HCV-RNA=430IU/mLatweek-2.

3.4. DeterminantsofearlyHCV-RNAdecayduringPI administration

TherapidHCV-RNAdecaysobservedatboth48hand week-2 of triple-therapy administration were highly homogenous in

H CV -RN A 4 8 h ( lo g IU /m L ) 0 1.0 2.0 3.0 4.0 5.0 Naïve patients (N=8) GT-1a (N=27) GT-1b (N=40) Previous relapsers (N=22) Previous non-responders (N=37) Cirrhotic patients (N=31) Non-cirrhotic patients (N=36) SVR to triple therapy (N=47)

Virological failure

to triple therapy (N=20) Naïve patients (N=18) GT-1a (N=36) GT-1b (N=52) Previous relapsers (N=24) Previous non-responders (N=46) Cirrhotic patients (N=45) Non-cirrhotic patients (N=43) SVR to triple therapy (N=62)

Virological failure

to triple therapy (N=26)

A

B

p=0.222a p=0.638b p=0.421a p=0.139a H C V -R N A 4 8 h ( lo g IU /m L ) 0 1.0 2.0 3.0 4.0 5.0 p=0.078a p=0.002b p=0.104a P<0.001a H C V -R N A 2 w ee k s (l o g IU /m L ) 0 1.0 2.0 3.0 4.0 5.0 6.0 H C V -R N A 2 w ee k s (l o g IU /m L ) 0 1.0 2.0 3.0 4.0 5.0 6.0

Fig.2. Box-plotsreportingthedistributionofhepatitisCvirusRNAvaluesat48handweek-2oftriple-therapyadministration.Patientswerestratifiedaccordingto baselinecharacteristics(A),suchasinfectinghepatitisCvirussubtype,previoustreatmentexperienceanddiagnosisofcirrhosis;andaccordingtofinaloutcomeof telaprevir/boceprevir-basedtripletherapy(B).Thenumberofpatientsincludedineachcategoryarereported.ap-valueswerecalculatedthroughMann–WhitneyUtest.b

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<100 IU/mL (N=57) >100 IU/mL (N=31) Week 2 HCV-RNA level L o g H C V -R N A 4 8 h -2 w dec a y ( IU /m L) 2.0 0 -2.0 -4.0 2.2 P<0.001

Median (IQR) = -1.7 (-2.3; -0.9) Median (IQR) = -0.9 (-1.2; -0.2)

Fig.3.Box-plotrepresentingthelogarithmichepatitisCvirusRNAdecaybetween 48handweek-2oftriple-therapyadministrationinpatientswithhepatitisCvirus RNAatweek-2lowerorhigherthan100IU/mL.Thenumberofpatientsincludedin eachcategoryarereported.P-valuewascalculatedthroughMann–WhitneyUtest. IU,internationalunits;IQR,interquartilerange.

allpatientsanalyzed,irrespectiveofHCV-genotype(p=0.848and p=0.849byMann–WhitneyUtest,respectively),previous treat-ment outcome (p=0.367 and p=0.831 by Kruskal–Wallis test, respectively),and diagnosisof cirrhosis (p=0.505 and p=0.753 byMann–WhitneyUtest, respectively)(Supp.Fig. S2,panels A andB).

Since the observed viraemia decays from baseline-to-48h and from baseline-to-week-2 were homogeneous, the absolute values of 48hand week-2 HCV-RNAwere expectedtodepend uponbaseline viraemia.Indeed, Spearman correlationtest con-firmeda strongpositive associationof HCV-RNA atthese early time-pointswithbaselinevalues.Thisindicatesthat,byincreasing baselineviraemia,alsoviraemiaatearlytimepointsconsensually increase,withastrongerconcordanceat48h(linearcorrelation coefficient=0.61,p<0.001)incomparisontoweek-2(linear cor-relationcoefficient=0.51,p<0.001).Thereasonforthisdifference couldlieintheobservationthat HCV-RNAvalueatweek-2was notonlydependentuponbaselineviraemia,butalsoontheslope ofsecond-phaseHCV-RNAdecay.Indeed,themedian(IQR) HCV-RNA48h-week2decaywas−0.9(−1.2;−0.2)logIU/mLinpatients with>100IU/mLat week-2 and −1.7 (−2.3;−0.9)logIU/mL in patients with <100IU/mL (p<0.001 by Mann–Whitney U test) (Fig.3).

3.5. PredictivevalueofHCV-RNAdeterminationafter48hand2 weeksoftriple-therapy

ToidentifytheoptimalHCV-RNAvalue(atboth48hand week-2time-points)abletodiscriminatevirological-outcome,bothin termsofsensitivityandspecificity,ROCcurveanalyseshavebeen performed.ROCcurveanalysisidentifiedaweek-2HCV-RNAvalue of 100IU/mL as an optimal cut-off in predicting SVR (sensitiv-ity=81%,specificity=71%).Overall,thepositivepredictivevaluefor HCV-RNA<100IU/mLatweek-2oftriple-therapywasof86%.

At48h, ROC curveanalysisidentified as optimal cut-off for sensitivity in predictingSVR an HCV-RNA valueof 1000IU/mL. Nevertheless,thisoptimizedcut-offofHCV-RNAat48hoftriple therapyhadlowersensitivityandspecificityinpredictingSVR (sen-sitivity=57%,specificity=70%)incomparisontoHCV-RNAcut-off of100IU/mLatweek-2,reachingapositivepredictivevalueof82%. TheachievementofRVRhadthebestspecificityinpredicting SVR(81%),butsensitivitywaslowerrespectingtoweek-2cut-offof 100IU/mL(63%versus81%,respectively).Positivepredictivevalue wasidenticaltothatobtainedwithweek-2cut-off(86%).

Therefore,inourstudypopulation,forSVRprediction,theuse of100IU/mLcut-offatweek-2seemstobethemostsuitablein comparisonto1000IU/mLcut-offat48handdetectableHCV-RNA valuesatweek-4.

By univariable logistic regression analysis, HCV-RNA≤ 100IU/mLat week-2wasalsoa strong predictorof SVR (Odds Ratio,OR[CI]=13.0[4.1–41.4],p<0.001)(Table3),evenstronger thantheachievementofanRVR(OR[CI]=8.5[2.5–28.8],p<0.001). Notably,theassociationbetweenHCV-RNAvalue≤100IU/mLand virologicalsuccesswasalsoconfirmedbymultivariableanalysis (OR[CI]=20.3[2.7–152.7],p=0.003)(Table3),aftercorrectionby baseline/earlydetectionofresistance,gender,age,HCV-genotype, cirrhosis,previousnull-responsetopegIFN+RBVandlowbaseline viraemia(≤600,000IU/mL).AlsotheRVRcorrelationwithSVRwas confirmedaftercorrectionbyconfoundingvariables(OR[CI]=18.7 [2.2–157.5],p=0.007).Amongconfoundervariables,alsofemale genderwassignificantlyassociatedwithsuccessbymultivariable analysis analysis (OR [CI]=11.0 [1.2–99.3], p=0.032) (Table 3). Probablyduetothehighnumberofmissingvalues,unfavourable IL-28Bgenotype(CTorTT)wasnotsignificantlyassociatedwith success by univariable analysis (OR [CI]=0.2 [0.0–1.9], p=0.64, datanotshown),anditwasnotconsideredasconfoundervariable inmultivariableanalysis.

3.6. Baseline/earlyresistanceandearlyvirologicalresponse NoneofthepatientswithundetectableHCV-RNAatweek-2 pre-sentedevidencesofbaseline/earlyRAVsbypopulationsequencing (0/17and0/8withavailableGRTatbaselineandwithinthefirst 4weeksofPIadministration,respectively).Allthesepatientsare SVR12.Onthecontrary,atleastonebaseline/earlyRAVwasfound

Table3

Univariableandmultivariablelogisticregressionmodelsforassociationwithvirologicalsuccesstotripletherapy.

Characteristic CrudeOR 95%C.I. p-value AdjustedOR 95%C.I. p-value

Lower Upper Lower Upper

HCV-RNA≤100IU/mLatweek2 13.0 4.1 41.4 <0.001 20.3 2.7 152.7 0.003

Atleastonebaseline/earlyresistancemutation 0.6 0.2 2.2 0.441 0.5 0.1 2.7 0.389

Gender(maleversusfemale) 2.7 0.9 8.3 0.083 11.0 1.2 99.3 0.032

Age(1yearhigher) 1.0 0.9 1.1 0.234 1.0 0.9 1.1 0.307

HCVgenotype(1aversus1b) 1.5 0.6 4.1 0.397 0.8 0.1 4.0 0.743

Cirrhosis(yesversusno) 1.0 0.4 2.6 0.975 0.6 0.1 2.7 0.500

PreviousnullrespondertoSOC 0.5 0.2 1.4 0.158 2.6 0.3 20.3 0.355

BaselineVL≤600,000IU/mL 2.3 0.8 6.4 0.116 1.4 0.3 7.9 0.672

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in14/47patientswithdetectableHCV-RNAatweek-2(p=0.001by Fisherexacttest).

Atbaseline,asexpected,RAVsweredetectedmorefrequently inpatientsinfectedwithGT-1a(15/50,30.0%)thaninGT-1b(3/56, 5.4%). The mostcommondetectedbaseline RAVwastheQ80K, foundin11/110(10.0%,9/11GT-1a)patientsanalyzed,followed byT54Sin4/110(3.6%,2/4GT-1a).Inaddition,oneGT-1apatient showedtheco-presenceofV36L+Q80KRAVs.Virologicalfailure wasobservedin5/11patientswithbaselineQ80K(allGT-1a),3/4 patientswithT54SandinthepatientwithV36L+Q80K.

DenovoRAVsdevelopmentatearlytime-pointswasobserved in7/39(17.9%)patients.AllhadHCV-RNAdetectableatweek-2and 5/7experiencedvirologicalfailure.

Overall,RAVseitheratbaselineordenovodevelopedduring PI-administrationhavebeenexclusivelyobservedinpatientsshowing detectableHCV-RNAvaluesatweek-2,whiletheywereabsentinall patientsreachingundetectableHCV-RNAvaluesatthistime-point. Thecombinationofresistanceandslowervirologicalresponsecan thusplayasynergicroleindeterminingtreatmentfailure.

4. Discussion

Thepresentstudyanalyzestheclinicalusefulnessofearlyviral responsetoTVRorBOCtreatmentinalargeandheterogeneous population ofpatients infectedwithHCVgenotype1.Wefound that,independentlyfromthePIemployed,a100IU/mLcut-offof HCV-RNA at week-2of triple therapy wasable todiscriminate patients withincreasedrisk of virological-failure from patients who, despitehepaticimpairmentorprevioustreatment experi-ence,aremostlikelytoreachtherapeuticsuccess.

ItiswellknownthatHCV-RNAdecayduringantiviraltreatment followsabiphasicprofile,asaconsequenceoftheadministration ofdrugswhichactbyblockingviralproduction[1,3].Theblockof denovovirionproductionfrominfectedhepatocytesdetermines arapidfirstphaseofHCV-RNAdeclineinserum.Aslowersecond phasemainlydependsupontheclearanceofinfectedcells, medi-atedthroughdeathorlossofreplicativeintermediates[3].PI-based tripletherapywasassociatedwithadeeperandfasterfirst-phase, aswellaswithafastersecond-phase,comparedtoregimens not-includingaDAA[3,27,28].

Inthisstudy,wefoundthatthefirst-phasedecline,classically comprisedwithinthefirst48hoftriple-therapyadministration, wasindeedveryintenseand, furthermore,highlyhomogeneous amongallpatientsanalyzed.Baselineclinicalcharacteristicshadno impactonthisfirst-phasedecline,andHCV-RNAvaluesat48hwere correlatedonlywithbaselineHCV-RNAvalues.ThisearlyHCV-RNA kineticswasalsocomparableamongthetwoPIs,supporting previ-ousresultsindicatingthattherapywithalead-inphasefollowedby additionofasingleDAAachievesasimilarearlyHCV-RNAreduction asincludingtheDAAfromthebeginning[29].

Recently,weshowedthattelapreviradministrationin difficult-to-treatpatients(i.e.previousnonrespondersorcirrhotic)leads to a slower second-phase decline in respect to naïve, non-cirrhoticpatients[6].Interestingly,thesecondphasedeclinewas particularly compromisedinthosewhoexperienced virological-breakthrough,andresultedinhigherHCV-RNAvaluesatweek-2of PI-basedtripletherapy.

Similarly,alsoinourwiderpopulation,patientswithdetectable HCV-RNA at week-2 more frequently experienced virological-failure to triple-therapy, either containingBOC orTVR. Indeed, virological-failure wasobservedin64.5% ofpatients with HCV-RNA>100IU/mLatweek-2versus0%inthosewithundetectable HCV-RNAvalues.

In our study population, two main mechanisms cooperated in determiningHCV-RNAlevelsatweek-2oftriple-therapy:(a)

baseline viraemia values and (b) the slope of second-phase (48h–week2)viraemiadecline.Highbaselineviraemiaisaknown riskfactorforvirological-failure[30,31],andthusitscorrelation withlowerresponsivenessisnotsurprising.Theslopeofsecond phasedecline,ontheotherhand,directlydependsontreatment efficacy,aspreviouslydemonstrated[3].Thiscorrelationwas con-firmedinthisstudy,sincepatientswithhigherweek-2viraemia were,inthemajorityofcases,thosewithpoorsensitivitytoIFN (previousnon-responders).

Overall,the determination of HCV-RNA at week-2of triple-therapywashighlysensitiveinpredictingSVR,and allowedthe identificationofpatientswithoutstandingviral-response.Indeed, inourstudy,atweek-2,23/88(26.1%)patientshadundetectable HCV-RNA,with23/23(100%)patientsreaching anRVRandSVR afterwards,versusonly 3/31(9.7%) RVRand 11/31 (35.5%) SVR amongpatientswithHCV-RNA>100IU/mL.Moreover,6cirrhotic patients and 4patients previously non-responder todual ther-apyhadundetectableviraemiaatweek-2,andnotablyallofthem achievedSVR.

Thecut-offsetat100IU/mLforHCV-RNAatweek-2of triple-therapyshowedthehighestsensitivityinpredictingSVRamong otherearlyHCV-RNAassessments,includingtheachievementof anRVR,withapositivepredictivevalueof86%.Thestrengthofthis correlationamongHCV-RNA≤100IU/mLatweek-2andSVRwas alsoconfirmedbyregressionanalysis.Indeed,thisearlyviraemia check-pointwasfoundtobea predictorofSVR asgoodas the achievementofanRVR,evenaftercorrectionbythemost com-monclinicalandviralparametersclassicallyinvolvedinsensitivity tofirst-generationPIsadministration.

OurcurrentstudyshowsalsothattheanalysisofNS3sequence atbaselinemayfurtherstrengthentheabilitytoidentifypatients withhigherprobabilityof success.Indeed,baseline presenceof RAVs(includingtheQ80K)orearlydevelopmentwereexclusively observedinpatientswithstilldetectableHCV-RNAatweek-2,and theassociationofRAVswithsuboptimalHCV-RNAdecay uncov-eredaconditionofhigherriskofvirological-failure,suggestingthe needforaclosevirologicalfollow-up.

Pharmacoeconomicanalysesandclinicalstudiessuggestthat the“costperSVR”stillfavourstheuseofpegIFN-RBVdual-therapy, ratherthanPI-basedtriple-therapy,inpatientscomplying “easy-to-treatcriteria”,suchasthosewhoexhibitexcellentviralresponse duringthefirst4weeksoftreatmentwithpegIFNandRBValone [30,32–35]. On the other hand, for patients who do not fully comply withpredictors of viral-response(i.e. beingdrug-naïve, non-cirrhotic,lowbaselineHCV-RNA,preferentiallyIL28-Bnon-TT andachievinganRVR),additionalevaluationofHCV-RNAatearly time-pointsduringPI-basedtriple-therapycouldactuallylimit:(a) theriskoffailurewiththedevelopmentofRAVs[17];(b)theonset ofseriousadverseevents;and(c)costsrelatedtodrugsand man-agementofcomplications.

Overall,thisstudyhasitsstrengthsandlimitations.Evenifthis isthelargeststudy,toourknowledge,analyzingearlyviral-kinetics withfirst-generationPIs in clinical practice,thepredictive val-uesofearlyHCV-RNAdecaycouldchangebyanalyzingawider population.Theadinterimnatureofthisstudyalsoaccountsfor aquitehighrateofvirological-failureobserved(54/158[34.2%]). Indeed,even ifthemajority ofpatientsstarted treatmentfairly closetogether,treatment-failuresgenerallyoccurafterfewweeks oftherapy,whilealongerperiodoftimeisnecessaryfortheSVR evaluation,therefore resultingin anunderestimation ofits fre-quency.Forthis reason,theoverallSVRratesshouldnotbeyet extrapolatedinthisstudy,andindeedtheassessmentoftreatment efficacywasnotanendpoint.

Inconclusion,duetotherapidevolutionoftreatmentscenarios withdifferentefficacyandcosts,itisimportanttoimplement tail-oredtreatments.Thepresentstudyprovidesaproofofconcept,to

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beconfirmedondifferentpopulationsandonalongertimespan, thatarapidearlyHCV-RNAdecay,withundetectableHCV-RNAat 2weeksafterfirst-generationPIinitiation,mayallowtopredict agoodtherapeuticoutcome,evenindifficult-to-treatpatients.On thecontrary,asuboptimalearlydecay,especiallyifassociatedwith thedevelopmentofRAVs,speaksinfavourofahighlyprobable virologicalfailure.

Conflictofinterest

A.Gasbarrini,A.DiBiagio,M.Angelico,C.F.PernoandF. Ceccherini-Silberstein have no conflict of interest with respect to this manuscript,however:A.Gasbarrinihasreceivedpriorconsultancy honorariafromMSD,gilead,jansenn,abbvie,alfawassermann.A. DiBiagiohasreceivedpriorresearchfundingand/orconsultancy honorariafromBristolMyersSquibb,Gilead,Janssen,MerckSharp &Dohme, Roche, and ViiV.M. Angelico has received funds for attending symposia,speaking, organizingeducational activities, grantresearchsupportandconsultancyfromRoche,Gilead,Merck Sharp&Dohme,JanssenCilag.C.F.Pernohasreceivedfundsfor attending symposia,speaking, organizingeducational activities, grantresearchsupport,consultancyandadvisoryboard member-ship, fromAbbott, Boehringer Ingelheim, Bristol MyersSquibb, Gilead,MerckSharp&Dohme,JanssenCilag,Pfizer,Tibotec,Roche, andViiV.F.Ceccherini-Silbersteinhasreceivedfundsfor attend-ing symposia,speaking, organizing educationalactivities, grant researchsupport,consultancyand advisoryboardfromAbbVie, MerckSharp&Dohme,Gilead,JanssenCilag,Roche,BristolMyers Squibb,andViiV.Theotherauthorsofthisstudydonothave any-thingtodisclose regardingfunding fromindustry orconflict of interestwithrespecttothismanuscript.

Acknowledgements

Thisworkwassupported by theItalian Ministryof Instruc-tion,UniversityandResearch(MIUR)(AccordidiProgramma2011: RBAP11YS7K001[HIRMA],BandieraInterOmicsProtocolloPB05 1◦),byMerckSharpe &Dohmeand byAviraliaFoundation.The

fundershadnoroleinstudydesign,datacollectionandanalysis, decisiontopublish,orpreparationofthemanuscript.

WethankRocheandAbbottforprovidinglaboratorymaterial forHCV-RNAdetermination,theClinicalHepatologyandMolecular Virologygroupsof“TorVergata”UniversityHospital,and particu-larlyFrancescaStafoggiafortechnicalsupport.

AppendixA. Supplementarydata

Supplementarydataassociatedwiththisarticlecanbefound,in theonlineversion,athttp://dx.doi.org/10.1016/j.dld.2014.11.010. References

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Figura

Fig. 1. Box-plots representing the overall distribution of hepatitis C virus RNA values at baseline and at early time points, up to week 4, of triple-therapy administration.
Fig. 2. Box-plots reporting the distribution of hepatitis C virus RNA values at 48 h and week-2 of triple-therapy administration
Fig. 3. Box-plot representing the logarithmic hepatitis C virus RNA decay between 48 h and week-2 of triple-therapy administration in patients with hepatitis C virus RNA at week-2 lower or higher than 100 IU/mL

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