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Journal
of
Neuroscience
Methods
jo u rn al h om epa g e :w w w . e l s e v i e r . c o m / l o c a t e / j n e u m e t h
Optimal
band
separation
of
extracellular
field
potentials
Cesare
Magri
a,b, Alberto
Mazzoni
c, Nikos
K.
Logothetis
a,d, Stefano
Panzeri
c,∗aMaxPlanckInstituteforBiologicalCybernetics,38Spemannstrasse,72076Tübingen,Germany bBernsteinCenterforComputationalNeuroscienceTübingen,Germany
cRobotics,BrainandCognitiveSciencesDepartment,ItalianInstituteofTechnology,ViaMorego30,16163Genova,Italy dDivisionofImagingScienceandBiomedicalEngineering,UniversityofManchester,ManchesterM139PT,UnitedKingdom
a
r
t
i
c
l
e
i
n
f
o
Articlehistory: Received19July2011
Receivedinrevisedform30October2011 Accepted2November2011
Keywords: Neuralcode LocalFieldPotential Visualcortex Mutualinformation Frequencybands
a
b
s
t
r
a
c
t
LocalFieldPotentials(LFPs)exhibitabroadbandspectralstructurethatistraditionallypartitionedinto distinctfrequencybandswhicharethoughttooriginatefromdifferenttypesofneuraleventstriggered bydifferentprocessingpathways.However,theexactfrequencyboundariesoftheseprocessesarenot knownand,asaresult,thefrequencybandsareoftenselectedbasedonintuition,previousliterature orvisualinspectionofthedata.Here,weaddresstheseproblemsbydevelopingarigorousmethodfor definingLFPfrequencybandsandtheirboundaries.Thecriterionintroducedfordeterminingthe bound-ariesdelimitingthebandsistomaximizetheinformationaboutanexternalcorrelatecarriedjointlybyall bandsinthepartition.ThemethodfirstpartitionstheLFPfrequencyrangeintotwobandsandthen succes-sivelyincreasesthenumberofbandsinthepartition.WeappliedthepartitioningmethodtoLFPsrecorded fromprimaryvisualcortexofanaesthetizedmacaques,andwedeterminedtheoptimalbandpartitioning thatdescribestheencodingofnaturalisticvisualstimuli.ThefirstoptimalboundarypartitionedtheLFP responseat60Hzintolowandhighfrequencies,whichhadbeenpreviouslyfoundtoconveyindependent informationaboutthenaturalmoviecorrelate.Thesecondoptimalboundarydividedthehigh-frequency rangeatapproximately100Hzintogammaandhigh-gammafrequencies,consistentwithrecentreports thatthesetwobandsreflectpartlydistinctneuralprocesses.Athirdimportantboundarywasat25Hz anditsplittheLFPrangebelow50Hzintoastimulus-informativeandastimulus-independentband.
© 2011 Elsevier B.V. All rights reserved.
1. Introduction
Local FieldPotentials(LFPs) are a massedsignalwhich cap-turesmultipleneuralcontributions,fromdendrosomaticdipoles generatedbysynapticactivitytonon-synapticslowactivitysuch asvoltage-dependentmembrane oscillationsandspike afterpo-tentials(Logothetis,2003).SinceLFPsaresensitivetosupraand subthresholdprocesses,investigatingstimulusencodingbyLFPs canofferadditionalinsightsintosensoryrepresentationsbeyond those offeredby onlymeasuringneuronal spike trains(Belitski etal.,2010;Logothetis,2003;Montemurroetal.,2008;Nicolelis andLebedev,2009;Rayetal.,2008).Theirstimulustuninghasbeen intensivelyinvestigatedinrecentyears(Belitskietal.,2008;Berens etal.,2008;Frienetal.,2000;Kayser andKonig,2004;Liu and Newsome,2006;SiegelandKönig,2003).LFPsexhibitabroadband spectralstructurewhichis traditionallypartitionedintodistinct frequencybands,initiallyintroducedinthehumanEEGliterature, whicharethoughttooriginatefromdifferenttypesofneuralevents
∗ Correspondingauthor.Tel.:+391070781437. E-mailaddress:stefano.panzeri@iit.it(S.Panzeri).
triggeredbydifferentneuralprocessingpathways(Buzsáki,2006). However,theexactfrequencyboundariesoftheseprocessesare notknown.Frequencybandsarethusoftenselectedbasedon intu-ition,previousresultsintheliteratureorvisualinspectionofthe data.Asaresult,thebandboundariesvarygreatlyacrossstudies. Forexample,thegammabandissometimesreferredtoasanarrow (afewHzwide)frequencyrange(LlinasandRibary,1993;Miltner etal.,1999)andothertimesasawideintervalspanningtensofHz (ChrobakandBuzsaki,1998;KruseandEckhorn,1996).
Arigorousapproachtodefiningtheboundariesofa stimulus-tunedLFPbandhasbeenproposedbySiegelandKönig(2003).Their method,basedonmaximizinganindexofselectivitytoastimulus parameter,allowstheidentificationofboththepartsofthe fre-quencyspectrumthatarebesttunedtoaspecificstimulus,and oftheboundariesthatoptimizethetuningofasinglebandtothe stimulus.Thisapproach,whichwassuccessfullyappliedtoidentify theoptimalboundariesfororientationtuningofthegammaband invisualcortex(SiegelandKönig,2003),requiresamodelofa tun-ingcurvedescribingtherelationshipbetweenanexternalcorrelate ofinterestandtheinducedchangesintheLFPbandconsidered. Acomplementaryapproachwasdevelopedbyourgroup(Belitski etal.,2008)forinvestigatingtherelationshipbetweenthepower 0165-0270/$–seefrontmatter © 2011 Elsevier B.V. All rights reserved.
ateachfrequencyintheFourierdecomposition–thesmallest fre-quencyelementinwhichwecanbreaktheLFPrange–andcomplex visualstimuli.ThisanalysisrevealedwhichregionsintheLFP spec-trumareinformativeaboutnaturalisticmoviestimuliandwhich regionsare,instead,stimulus-unrelated.However,theseprevious methodscannotdeterminehowtopartitiontheentireLFPrange insuchawaythatthebandsinthepartitioncollectivelycarrythe largestpossibleamountofinformationaboutasetofstimuli.In fact,byfine-tuningonebandatatimeonemightfailtotakeinto accounttherelationshipsbetweendifferentfrequencyregions.For instance,tuningonebandatatimemayindividuateasetofbands whichareindividuallyhighlyinformativeandthatallcarryvery similarinformation,butmayfailtoindividuatebandsthatexpress complementaryaspectsof stimulustuningandthuscarry more informationcollectively.
Herewe introducea newprocedureforpartitioning theLFP responseintobandsthatcollectivelycarrymaximalmutual infor-mationabout a setof external correlates.This proceduredoes notmake any assumptionon thetype of relationshipbetween thepower in an LFP band and the external correlate of inter-est.Rather,becauseof theproperties of mutual information, it naturallytakesintoaccountlinearandnon-linearcorrelationsat anyorderaswellasanyrelationshipbetweenthepowersin dif-ferentbands. Thearticleis structuredasfollows.Afterdefining theprocedure,weinvestigateandaddresstheproblemsrelated toits computationalimplementation. We then apply the tech-niquetotheelectrophysiologicalsignalrecordedfromtheprimary visualcortexofanesthetizedmacaques,andwedeterminea sta-blepartitionofLFPsintobandsthatcarriesanoptimalamountof informationaboutallvisualfeaturesinthemovie.
2. Materialsandmethods
2.1. Recordingprocedures,sensorystimulianddataextraction We analyzed sensory evoked LFPs and MUA recorded from primary visualcortex (V1) of two anaesthetized monkeys. The recordingprocedures and stimulation paradigms for the differ-entdatasetsaredescribedshortlyinthefollowingandhavebeen detailedpreviously(Belitskietal.,2008;2010;Montemurroetal., 2008). All experiments were approved by the local authorities (Regierungspräsidium)andwereinfullcompliancewiththe guide-linesoftheEuropeanCommunity(EUVD86/609/EEC)forthecare and useof laboratoryanimals. Prior totheexperiments, form-fittingheadpostsandrecordingchamberswereimplantedduring anasepticandsterilesurgicalprocedure.
Recordings from V1 of two adult rhesus monkeys (Macaca Mulatta)were obtainedwhile the animals were anaesthetized (remifentanil, 1g/kg/min), muscle-relaxed (mivacurium, 5mg/kg/h) and ventilated (end-tidal CO2 33mmHg, oxygen
saturation>95%).Bodytemperaturewaskeptconstant and lac-tatedRinger’ssolution supplied (10ml/kg/h).Vital signs(SpO2,
ECG,bloodpressure,endtidalCO2)werecontinuouslymonitored.
Neuronal activity was recorded from opercular V1 (foval and para-foveal representations) using microelectrodes (FHC Inc., Bowdoinham, Maine, 300–800kOhms), signals were high-pass filtered(1Hz;digitaltwopoleButterworthfilter),amplifiedusing anAlphaOmegaamplifiersystem(AlphaOmegaEngineering)and digitizedat20.83kHz.Binocularvisualstimuliwerepresentedat aresolution of640×480pixels(fieldof view:30◦×23◦,24bit truecolor,60Hzrefresh)usingafiberopticsystem(Avotec,Silent Vision, Florida). Stimuli consisted of ‘naturalistic’ complex and commercially available movies (30Hz frame rate), from which 3.5–4.3minlongsequenceswerepresentedandrepeated30–40 times.We confirmed that thereceptive fieldsof allmulti-unit
activityfromeachrecordingsitewerewellwithinareaofvisual stimulation(Raschetal.,2008).
3. Informationtheoreticanalysis
3.1. Definitionofthemaininformationtheoreticquantities
TodeterminehowwellthepowerinagivenLFPbandencodes thesensorystimuluswecomputedShannon’smutualinformation betweenthestimulusandthepoweroftheLFPband(Shannon, 1948),whichisdefinedas I(S;B)=
b,s P(s)P(b|s)log2 P(b|s) P(b) (1)whereP(s)istheprobabilityofpresentingstimuluss,P(b|s)isthe probabilityofobservingapowervaluebgivenpresentationof stim-uluss,andP(b)istheprobabilityofobservingpowervaluebacross alltrialstoanystimulus.I(S;B)quantifies,inunitsofbits,the reduc-tionofuncertaintyaboutthestimulusthatcanbegainedfromthe observationofasingle-trialpowervalue.Onebitcorrespondstoa reductionofuncertaintyofafactoroftwo.I(S;B)iszeroonlywhen thestimulusandthepowerarestatisticallyindependent,indicating thatnoknowledgeaboutthestimuluscanbegainedbyobserving theresponse.
Eq.(1)canbeextendedtoquantifytheinformationaboutaset ofstimuligainedbythesimultaneousobservationofthepowerin LdifferentLFPbands,asfollows:
I(S;B1...BL)=
b,s P(s)P(b1...bL|s)log2 P(b1... bL|s) P(b1...bL) (2) where in the above P(b1...bL|s) is the probability of the jointobservationofobservingjointlythepowervaluesb1...bLinthe
consideredbandsduringasingle-trialpresentationofstimuluss. 3.2. Definitionofstimulusset
Computationofinformationrequiresthedefinitionofasetof sensorystimuliSaboutwhichtheneuralresponsecarries informa-tion.Ourdatasetwasmadeofrecordingsinresponsetorepeated presentationofthesamemovie.Toquantifytheamountofvisual informationcarriedbytheLFPpowerinthisexperiment,weused afeature-independentdefinitionofstimulus,describednext(de RuytervanStevenincketal.,1997;Strongetal.,1998).Themovie presentationtimewasdividedintonon-overlappingtimewindows oflengthT=960msandeachwindowwaslabeledwitha stimu-lusidentificationnumber(s=1,2,...). Inthispaperwepresent resultsobtainedwithawindowoflengthT=960ms,butresults werequalitativelysimilarwhenvaryingthelengthoftherunning windowTintherange480–1920ms(notshown).TheLFPpower wasquantifiedseparatelyineachwindow(seebelow)andwe com-putedtheinformationbetweentheLFPpowerandthesectionofthe movie(“stimuluswindow”)atwhichtheresponsewascollected. Itisimportanttonotethattheresponsecollectedinthes-th win-dowispotentiallyelicitedbythewholetemporalpatternofvisual stimulationuptothelasttimepointofstimuluswindows. There-forethisdefinitionofinformationcarriedbytheresponseabout whichstimuluswindowwasbeingpresentedtakesintoaccount thepotentialcontributionsofallstimulusfeaturesatallprevious movieframesaswellasthecontributionofthevisualfeaturesin thecurrentmovieframe.Assuch,theinformationcalculationdoes notassumeaninstantaneousrelationshipbetweenLFPsand stim-uli,andtakesintoaccounttheeffectsofalltimelagsbetweenthe neuralresponseandanyvisualfeaturethatprovokedit.This def-initionofstimulussethastheadvantagethatit doesnot make anyassumptionsaboutwhichstimulusfeaturesorcombinationsof
them,eitherpresentedatthecurrenttimeorintheperiodpriorto theconsideredneuralresponse,provokestheneuronalresponse. Thisalsomakestheinformationvalueformallyinvarianttoany rigidtimeshiftbetweenstimuluswindowsandneuralresponse correspondingtoanyassumptionofagivenlatencyvaluebetween stimuliandresponses.
3.3. Computationofspectralpowerineachbandforinformation calculation
Computation of information requires the evaluation of the single-trialspectralpowerofeachbandineachofthe“stimulus windows”oflengthTdefinedabove.Herewecomputedthe single-trialpowerineachwindowusingthemultitapermethod(Percival andWalden,2006)withtime-bandwidthparameterNW=2.This methodofspectralestimationwaschosenbecauseitgivesan excel-lenttrade-offbetweenbiasandvarianceandbecauseitwasshown toworkwellonLFPdata(Belitskietal.,2008;Pesaranetal.,2002). Tocomputethepowerinagivenfrequencybandweintegratedthe spectralpowerbetweenthebandboundaries.However,we veri-fiedthattheuseofalternativemethodsforbandpowerestimation withinawindow,suchasaveragingoverthetimepointswithinthe windowtheinstantaneousHilbertpowerofasignalband-passed withinthedefinedboundboundarieswithaKaiserfilter(asdone e.g.in(Belitskietal.,2010;Kayseretal.,2009)),gaveresultswhich wereessentiallyidenticaltothatobtainedwiththesummationof Multitaperpowerusedhere(see(Magri,2009)formoredetails). 3.4. Informationredundancy
TheinformationredundancybetweenthepowerindifferentLFP bandswasdefinedasthedifferencebetweentheinformation pro-videdbythejointsignalsb1,...,bLandthesumoftheindependent
informationvalues(Belitskietal.,2008;Hatsopoulosetal.,1998; Polaetal.,2003;Schneidmanetal.,2003):
Red(B1...BL)=I(S;B1...BL)− L
i=1
I(S;Bi) (3)
Positivevalues of redundancyindicatethat thejoint knowl-edgeofthepowerofallbandscarries lessinformationthanthe sumoftheinformationprovidedbyeachindividualband.Negative valuesofredundancydenotethepresenceofsynergistic interac-tionbetweendifferentbands,whichmakethetotalinformation greaterthanthesumoftheinformationprovidedindividuallyby eachband.Wenormalizedredundancyexpressingitaspercentage ofthetotalinformationcarriedbythejointobservationofallbands inthepartition.Thispercentageredundancywasthusdefinedas Red(B1...BL)=100×
Red(B1...BL)
I(S;B1...BL)
(4) Wealsocomputedtheinformationcarriedbythepowerata sin-gleFouriercoefficientratherwithinanLFPband.Thecalculationof thesinglefrequencybininformationwasdoneexactlyasdescribed above,theonlydifferencebeingthatbwasnowthepowerofa singleFouriercoefficient.
4. Computationofinformation
The computation of the information with Eqs. (1) and (2) requirestheestimationofstimulus-conditionalresponse probabil-itiesP(b|s)andP(b1,...,bL|s).Theseprobabilitiesarenotknowna
prioriandmustbemeasuredexperimentallyfromafinitenumber oftrials.Inthisworkwecomparedtwocomplementaryprocedures formeasuringtheprobabilitydistributionsandthecorresponding informationvalues,namely,theDirectMethodandtheGaussian
Methoddescribedbelow.Allinformationanalyseswereperformed usingtheInformationBreakdownToolbox(www.ibtb.org;(Magri etal.,2009)).
4.1. TheDirectMethod
Computation ofinformation according totheDirect Method (Strongetal.,1998)wasasfollows.Wefirstdiscretizedtheresponse spacebybinningtheresponsepowerintoMequi-populatedbins. TheparameterMwasvariedbetween3and32inordertoevaluate the effect of the discretization on the Direct information esti-mates.Wethenestimatedtheprobabilitiesofthediscreteneural responsesbysimplycomputingthefractionoftrialsinwhicheach responsevalueisobserved,andthenbyinsertingthese response-probabilityestimates intotheinformation Eqs.(1) and (2).The DirectMethod,beingbasedonempiricallycomputingthe prob-abilityhistogramsofdiscreteordiscretizedneuralresponses,does notmakeanyassumptionontheshapeoftheprobability distri-butions.ThismakestheDirectMethodwidelyapplicabletomany differenttypesofdata.
Evenwheneachstimulusisrepeatedmanytimes,aswasthe casehere,theestimatedprobabilitiessufferfromfinitesampling errors,whichinduceasystematicerror(bias)ininformation esti-mates(Panzeriet al.,2007).Tocorrect for thebias, weused a quadraticextrapolationprocedure(Strongetal.,1998)toestimate andsubtractoutthebiasofeachinformationquantity.When com-putingtheinformationconveyedbythejointobservationoftheLFP powerinmorethanonebandweadditionallyappliedthe “shuf-flingprocedure”describedin(Montemurroetal.,2007;Panzeri etal.,2007),whichgreatlyreducesthebiasofmultidimensional informationestimatesandtypicallymakestheresidualbias nega-tive.Thisimpliesthatourestimatesofthejointinformationcarried bytwosignals(andthusofredundancy)tendtobeslightlybiased downward.
4.2. TheGaussianMethod
AnalternativeapproachtotheDirectestimation of informa-tionistouseanalyticalmodelsoftheprobabilitydistributions;fit thesedistributionstothedata;andthencomputetheinformation fromtheseprobabilitymodels.TheGaussianMethodfor comput-inginformationandentropiesistheonebasedonfittingresponse probabilitiestoGaussianfunctions.
UndertheGaussianhypothesis,mutualinformationisgivenbya simplefunctionofthetrial-to-trialvarianceofLFPresponses(Cover andThomas,2006)
I(S;B)= 12(log2[2e|2(B)|]−log2[2e|s2(B)|]) (5)
where|2(B)|and|
s2(B)|arethedeterminantsofthematricesof
covariancecomputedacrosstrialsandstimuli,andacrosstrialsto stimuluss,respectively.
TheGaussian Methodhastwo mainadvantages: itdoesnot requiredatadiscretizationpriortotheinformationcalculation,and itdependsonlyonafewparametersthatcharacterizetheneural response(i.e.,thevarianceandcovarianceoftheresponses),which makesitmoredata-robustandlesspronetosamplingbiasthanthe Directcalculation(Magrietal.,2009;Yuetal.,2010).The poten-tialdangerwiththisapproachisthattheestimatesprovidedbyEq. (2)maybeinaccurateiftheunderlyingdistributionsarenotclose enoughtoGaussians.
AlthoughlessseverethanintheDirectcase,thebiasofthe infor-mationcalculationduetolimitedsamplingisstillpresentwhen usingtheGaussianMethod.Whentheunderlyingdistributionsare
GaussiananexactexpressionforthebiasofI(S;B)canbecomputed asfollows(Goodman,1963;Misraetal.,2005;Oymanetal.,2003): bias[I(S;B)]=gbias(Ntr×Nwin)−
s
p(s)gbias(Ntr) (6)
whereNtr isthenumberofavailabletrials perstimulus(inour
experimentthenumberofmovierepetitions)andNwinisthe
num-berofstimuli(inourcasethenumberofwindowsoflengthTinto whichthemoviepresentationtimewassubdivided).Thefunction gbias(·)isdefinedas gbias(N)= 1 2 ln 2
⎡
⎣
Lln 2 N−1 + L j=1 N−j 2⎤
⎦
(7)and isthepolygammafunctionandListhenumberofbands considered.
Whenusing theGaussian Methodwetookthecubic rootof power;wefittedthedistributionofthisresponsetoeachstimulus toaGaussian;andwefinallycomputedtheinformationthrough Eq.(5)subtractingtheanalyticGaussianbiascorrection,Eq.(6). Thereasonforapplyingthecubicroottransformationisthat mul-titaperpowerestimatesareasymptoticallychi-squaredistributed (PercivalandWalden,2006)thustheircubicrootisapproximately Gaussian(Wilsonand Hilferty,1931).The cubicroot operation, beingmonotonic,doesnotaffecttheunderlyinginformationvalues ofthepower,butitmakesresponseprobabilitiesmuchmore Gaus-sianandthusfacilitatesinformationestimationwiththeGaussian Method.
4.3. DescriptionoftheoptimalprocedureforpartitioningtheLFP response
Theprocedurethatweproposeforanoptimalpartitionofthe LFPrangeintoagivennumberofbandsworksasfollows.First,we definethehighandthelow cutoffsfrequenciesthatdelimitthe partofthespectrumoftheextracellularsignalwhichistakento betheLFP.Thehighfrequencycutoff,usuallytakenintherange betweenoneandafewhundredHz,isnotconsistentlydefinedin theliterature.Ourapproachhereistoconsidertheeffectofdifferent valuesofthisparametersuponthebandpartition.Ontheother hand,thelowfrequencycutoffoftheLFPisusuallyconstrainedonly bythehighpassfilterofthepreamplifierintherecordingsetup, whichinourcasewas1Hz(seeSection2).Becausethepowerof theextracellularsignalisnegligiblebelowthishigh-passvalue,in thefollowingforsimplicitywewillreportourresultsusingalow frequencycutoffof0Hz.However,theresultswouldhavebeen identicalhadweusedalowfrequencycutoffof1Hz.
OncetheLFPcutofffrequencieshavebeenspecified,ourmethod seekstopartitionthisrangeintoanumberofbandschosento maxi-mizetheinformationcarriedbytheLFPpartitionaboutanexternal setofcorrelatesofinterest,suchasasetofsensorystimuli.This meansthat,amongallpossiblepartitionsoftheLFPrangeintothe considerednumberofbands,weselecttheonewhichextractsthe largeststimulus-informationasdefinedinEq.(2).Additionally,we proposetoimplementthisprocedureinanincrementalway,i.e. westartbypartitioningtheLFPresponseintotwobandsandwe thenincreasethenumberofbandsconsidered.Thisisusefulfor tworeasons.First, itprovidesa waytoranktheboundariesby importance,undertheassumptionthat theboundariesdefining theoptimalpartitionwithsmallnumberofbandsaremore funda-mentalthanboundariesappearingonlyinoptimalpartitionswith alargernumberofbands.Second,theincrementalprocedure per-mitstoidentifytheboundariesthataremoststabletothenumber ofbandsconsidered,i.e.ifaboundaryidentifiesanoptimal par-titionintoagivennumber ofbands,thesameboundaryshould
alsobelongtotheoptimalpartition withonemore band. Indi-cationsthatthebandsarestabletorecursiverefinementofthe partitionareimportanttosupportthenotionthattheidentified bandboundariesaretrue“separators”ofdifferentneuralprocesses, oratleastarestableboundariesofspectralregionswhichexpress complementaryinformationaboutthestimulus.
5. Results
WerecordedLFPsfrom23sitesin theprimaryvisualcortex (V1)fromtwoanesthetizedmonkeys,usinganarrayofelectrodes, duringthepresentationofa3.5-to4.3-min-longsequencefrom commerciallyavailablemovies.Eachmovieextractwasrepeated 30–40times.Theresponsesofthesamesitetodifferentmovies wereanalyzedseparately.Insomecases,wewereabletomeasure theresponsesofarecordingsitetorepeatedpresentationsofa sec-ondorthirddifferentmovie.Insuchcases,theresponsesofthe samesitetodifferentmovieswereanalyzedseparately.Thisgave usatotalof57cases,whichwecollectedalltogetherinour popu-lationanalysisandweconsideredeachofthem,forsimplicity,asa differentrecordingsite.
ThespectrogramoftheLFP(Fig.1A)wastypicalofprimary cor-tical recordings,in that itshoweda broadbandspectrum with significantpoweratfrequenciesinthewholerange0–100Hzand withthepowerdecreasingathigherfrequenciesafterreachingan initialpeakatlowfrequencies(inthiscasethepeakwasat2Hz). Presentationofthemoviestimulusinducedamarkedincreasein spectralpowerbetween40and150Hzoverthepowerobserved duringspontaneousactivity.
5.1. TheinformationconveyedbysingleLFPfrequencies
Thedatasetusedinthisstudyhasbeeninvestigatedinseveral previousworksfromourgroup(Belitskietal.,2008,2010;Magri etal.,2009).Inthesestudiesweinvestigatedtheinformationabout anaturalisticmoviestimuluscarriedjointlybytheLFPpowerat eachfrequencyoftheFourierspectrum(Belitskietal.,2008;Magri etal.,2009), and thecorrelations betweenLFPpowerat differ-entfrequencies(Magrietal.,2009).Here webrieflysummarize theseresultsfromthesepreviousworks,withtheaimof point-ingtotheattentionofthereaderthefactsandfindingsthatare mostrelevanttotheanalysispresentedinthisstudy.Wealso facil-itatethecomparisonbetweenthepresentstudyandourprevious workbyre-computingourpreviouslypublishedinformation quan-titieswithexactlythesameinformationestimationalgorithm(the GaussianMethod)usedforthenewoptimalbandpartitionresults. WebeginthissummarybyreportingtheinformationthatLFP powercarriesaboutwhichscenewasbeingpresented.Theaverage overallrecordingsisreportedinFig.1B.Wefoundtwo informa-tivebandsintheLFPspectrum:alowfrequencyrangebelow12Hz (correspondingtothedeltaandthetabands)andahighfrequency range(above50Hz)inthegammaandhigh-gammabands.While theinformationatlowfrequencieswashighonlyoveranarrow bandcenteredaround5Hz,theinformationpeakathigh frequen-cieswasbroad and long-tailedtoward frequencies higher than 100Hz.Intermediate frequencies[12–50Hz]didnotcarrymuch information.
Havingestablishedthatbothgamma,high-gammaandlowLFP frequenciesconveyinformation,thenextimportantquestionisto determinewhetherthedifferentinformativefrequenciesranges areredundantornot,i.e.whetherornottheycarrythesameor differentstimulusinformation.Wecomputedboththejoint infor-mationcarriedbythepowerofpairsofLFPfrequencies(Eq.(2))and theirredundancy(Eq.(3)).Theinformationobtainedbythe com-binedknowledgeofthepoweratlowfrequenciesandthepowerat
Fig.1.TheinformationcarriedbyLFPpoweratsinglefrequencies.Resultsare aver-agedoverasetof57V1recordingsitesfromanaesthetizedmacaques.Information estimateswerecomputedusingtheGaussianMethodcorrectedwiththeGaussian biascorrectionprocedureandusingthecuberootoftheLFPpowerintensities.(A) AveragepowerspectrumoftheLFPsrecordedduringthepresentationofa naturalis-ticmovie(solidline)andduringspontaneousactivity(dashedline).(B)Information aboutanaturalisticmoviestimuluscarriedbyLFPpoweratsinglefrequencies. TheareaindicatestheSEM.(C)Left:informationaboutanaturalisticmovie car-riedjointlybytheLFPpowerattwofrequencies.Right:insetoftheinformation valuesintheregion50–150Hzindicatedbytherectangleintheleftpanel.(D)Left: theredundancybetweentheinformationcarriedbytheLFPpowerattwo frequen-cies.Right:insetoftheredundancyvaluesintheregion50–150Hzindicatedbythe rectangleintheleftpanel.
gammafrequencieswasnearlythesumoftheinformationcarried bythetwofrequenciesseparately(Fig.1C).Thismeansthatthe redundancybetweentheinformationcarriedbythepowerofhigh andlowfrequenciesisnearlyzero(Fig.1D).Thiszeroredundancy reflectedthefactthat,asshownin(Belitskietal.,2008;Magrietal., 2009),LFPfrequenciesbelow40Hzweretotallydecoupledfrom gammaandhigh-gammaoscillations(bothintermsofsimilarity ofstimulusselectivity(“signalcorrelations”),andoftrial-to-trial covariations(“noisecorrelations”).
Incontrast,frequenciesinthegammabandandhigh-gamma bandwerehighlyredundantbetweeneachother(Fig.1D).Thiswas because(Belitskietal.,2008;Magrietal.,2009)gamma frequen-cieshadasimilarresponseprofileacrossdifferentmoviescenes(in otherwords,theyhadhigh“signalcorrelation”).Theredundancy wasparticularly pronounced betweenfrequencies in the range 50–100Hz,suggestingthatallfrequenciesinthisrangereflecttoa largeextentthesamenetworkphenomenon.Wefound consider-ablysmallerredundancybetweenfrequenciesinthegammarange
[50–100Hz]andthoseinthehigh-gammarange,suggestingthat gammaandhigh-gammamayreflectpartlydifferentneural phe-nomena.
5.2. Validationofthemethodsusedtoestimateinformation carriedbythepowerintheLFPbands
AproblemlimitingtheuseoftheDirectMethodinourstudy is that it can only beappliedto computethe information car-riedjointlybyoneormaximumtwoLFPbands.Thesmallnumber (30–40)oftrialsavailabledoesnotallowanaccuratesamplingof theprobabilitydistributionsrequiredforcalculatinginformation withtheDirectMethodwhenseveralbandsareconsidered.Thisis because,asreviewedin(Panzerietal.,2007),thebiasofthedirect methodgrowsexponentiallywiththenumberofdimensionsof theresponsespace(whichinthiscasecorrespondstothe num-berLofbandsconsideredintheinformationcalculation).Thisbias problemisgreatlyalleviatedbytheGaussianMethod,becauseit requiresextractingonlyasmallnumberofparametersfromthe data.Theseparameterscanberobustlycomputedusingfewtrials evenwhenseveralbandsareconsideredatthesametime.Before applyingtheGaussianMethod,however,weneedtoensurethat methodisaccurateonthedatasetunderanalysis.Tothisaim,we comparedinformationvaluesobtainedwiththeGaussianandwith theDirectMethodwhenonlyoneortwoLFPbandswere consid-ered.Ifthetwomethodsreturncomparableinformationresultswe canconcludethattheGaussianMethodcanbeusedsafelyfor com-putingtheinformationcarriedbythepowerofseveralLFPbands. TheGaussianMethodwaspreviouslyvalidatedonsinglefrequency bins(Magrietal.,2009),butnotyetonpowerofextendedbands.
Webeganthis checkbycomputingthestimulus-information carriedbytheLFPpowerwithinafrequencybandB=[f–250Hz] (for61valuesoffuniformlydistributedbetween0and250Hz) usingboththeDirectandtheGaussianMethod.Forthe computa-tionwiththeDirectMethodwevariedM,thenumberofbinsused fordiscretizingtheneuralresponse,between3and32.Thelatter isanupperlimittothenumberofbinsforwhichwecouldstill computelargelyunbiasedinformationestimateswiththeDirect Methodgiventheavailablenumberoftrials,see(Panzerietal., 2007).Wefound(Fig.2A)thattherelationbetweentheinformation valuesobtainedwiththetwomethodswasapproximatelylinear. Whenfew(M=3,4,6)binswereusedwiththeDirect computa-tionthelinearregressorlaybelowthequadrantdiagonal,meaning thattheDirectMethodusedwithsmallnumberofbinsprovides consistentlylowerinformationvaluesthantheonesestimatedby theGaussianMethod.Thislikelyhappensbecausetheuseofcoarse responsediscretizationleadstoaninformationloss.However,the slope,b,ofthelinearregressorincreasedwithincreasingnumber ofbinsusedfortheDirectcomputation,suggestingthattheuseof finerbinsreducedtheinformationlossoftheDirectMethod.For M>13,theintersectaandtheslopeb(theparametersofthelinear regressor)reachedaplateauata=0andb=1(Fig.2B), demonstrat-ingthatforlargenumberofbinsMtheGaussianandtheDirect Methodsprovideessentiallyidenticalresults.
Fig.2BshowswhathappenswhentheGaussiananalysisis per-formedwithoutapplyingthecuberoottransformationpriortothe computationofinformation:independentlyofthenumberofbins usedfortheDirectMethod,theGaussianandtheDirectMethod failedtoconvergetoacommonestimationvalue.Thisprovesthat thecuberoottransformationisanecessarystepforreliably com-putingtheinformationconveyedbyLFPpowerusingtheGaussian Method.
Finally,wecomputedthevaluesof thestimulusinformation I(S;B1B2)carriedjointlybyapartitionoftheLFPresponseinto two-bandsB1=[0Hz–f]andB2=[f–250Hz]forallpossiblevalues of theboundary parameterfbetween 0and 250Hz. Again,we
Fig.2.ValidationoftheGaussianMethodtoevaluateinformation.Dataweretaken fromarepresentativecase(channel7ofsessionD04nm1).Unlessotherwisestated, GaussianinformationestimateswerecomputedusingtheGaussianMethod cor-rectedwiththeGaussianbiascorrectionprocedureandusingthecuberootofthe powervalues(seetext);theDirectinformationvalueswerecomputedafter dis-cretizingthepowerresponseintoMequi-populatedlevels.(A)Comparisonofthe informationvaluesobtainedusingtheGaussianMethodandtheDirectMethodfor theinformationaboutanaturalisticmoviestimuluscarriedbyLFPpower.Thered scatterplotshowsGaussianandDirectestimatesofthestimulus-information car-riedbytheLFPpowerinafrequencybandofwidth[f–250Hz]fordifferentvaluesof fbetween0and250Hz.Theorangescatterplotillustratesthestimulus-information carriedjointlybytheLFPpowerintwofrequencybandsofwidth[0Hz–f]and [f–250Hz]forthesamevaluesoftheparameterfconsideredforthesingle-band case.Forbothscatterplots,M=3binswereusedfordiscretizingthepowerresponse fortheDirectcomputation.Thewhitesolidlineandthewhitedashedlineillustrate thelinearfittothepointsinthesingle-bandinformationandinthetwo-bands informationscatterplots,respectively.Thelightgrey,thedarkgreyandtheblack linesindicatethelinearfitwhenM=4,6and16levelsareusedforthe discretiza-tion,respectively(thecorrespondingscatterplotsarenotshownforthesecases). Thesameconventionisusedasforthewhiteline,withthesolidandthedashed linesindicatingthefitforthesingle-bandandforthetwo-bandsinformation val-ues,respectively.Notethat,duetothelimitednumberoftrialsavailable,forM=16 binsitwasnotpossibletocomputetheDirectinformationforthetwo-bandscase, thereforeonlythesolidlineisshown.Thegreendashedlineindicatesthequadrant diagonal.(B)Asymptoticbehavioroftheslopeparameter,b,andoftheintercept parameter,a,ofthelinearfitbetweeninformationvaluesobtainedwiththeGaussian andtheDirectMethodsasafunctionofthenumberofbins,M,usedfordiscretizing thepowerresponsefortheDirectcomputation(blueline).Mwasvariedbetween 3and32.Thecyanlinesindicatethevaluesofaandbwhennocuberoot trans-formationisappliedtotheLFPpowerforthecomputationofinformationwiththe GaussianMethod.
found(Fig.2A)alinearrelationshipbetweentheinformation val-uesobtainedusingtheDirectandtheGaussianMethod,theslopes ofthelinearfittingcurvesbeingnearlyidenticaltothoseobtained whenonlyonebandwasconsidered.Note,however,thatinthis casewecouldnotcomputeinformationforM>6usingtheDirect Methodbecausethenumberoftrialsavailabledoesnotallowto properlysampletheresponsespaceforlargevaluesofM.
Taken together theseresults demonstrate that the accuracy oftheGaussianapproximationtocomputeinformationfromLFP powers.Whencomputingtheinformationaboutamovie stimu-luscarried bythepowerinoneor moreLFPbands,differences betweenGaussianandDirectinformationvaluesarisemainlyfrom thediscretizationusedfortheDirectprocedureandthatthetwo methodsprovidecomparableresultswhenenoughbinsareused forthediscretization.
Inwhatfollows,unlessotherwisestated,wewillalwaysusethe GaussianMethodwiththeGaussianbiascorrection(seeSection2) forcomputinginformationvalues.
5.3. PartitioningofLFPresponsesintotwobands
Webegan byinvestigatingwhatisthebestwaytopartition theLFPspectrumintotwofrequencybands.AlthoughtheLFPis consistentlydefinedintheliteratureasthelowfrequencyrange ofthespectrumoftheextracellularlyrecordedneuralsignal,there
Fig.3. PartitioningtheLFPintotwobands.Resultsare averagedoverasetof 57V1recordingsitesfromanaesthetizedmacaques.Informationestimateswere computedusingtheGaussianMethodcorrectedwiththeGaussianbiascorrection procedureandusingthecuberootofthepowervalues.(A)Theinformationabout anaturalisticmoviestimuluscarriedjointlybythepowerinthetwoLFPbands B1=[0Hz–f]andB2=[f–250Hz]asafunctionoftheboundaryparameterfvaried between0and250Hz.ThegreyareaindicatestheSEM.Thedashedanddottedlines illustratetheinformationobtainedwhenvaryingtheupperedgeofB2from250to 200andto300Hz,respectively.(B)Thepercentageredundancybetweenthe infor-mationcarriedbythepowerinthetwoLFPbandsB1andB2definedasinpanelA. ThegreyareaindicatestheSEM.Thedashedanddottedlinesillustratethe redun-dancyobtainedwhenvaryingtheupperedgeofB2from250to200andto300Hz, respectively.(C)Theinformationaboutanaturalisticmoviestimuluscarried indi-viduallybyLFPpowerinthebandB1=[0–60Hz]andbytheLFPpowerintheband B2=[60–250Hz].TheerrorbarsindicatetheSEM.Thetrianglemarkerindicatesthe informationconveyedbytheunpartitioned[0–250Hz]LFPrange.
isnoagreementabouttheprecisefrequencyrangethatshouldbe consideredasLFPactivity.Someauthorsincludefrequenciesonly upto100Hz,whileothersincludeuptoseveralhundredHz.Here westartedbyassumingtheLFPspectrumtorangefrom0to250Hz. Welatercheckedfortheeffectofconsideringotherdefinitionsof theLFPfrequencyrange.
Wecomputedthestimulus-information,I(S;B1B2),carriedby theLFPpowerwhenpartitionedintothetwobandsB1=[0Hz–f] and B2=[f–250Hz], as a function of the boundary parameterf (with0<f<250Hz).Wefound(Fig.3A)thattheamountof infor-mationcarriedjointlybythetwobandswas,onaverageacross thepopulation,maximalwhensplittingthebandsatf=60Hz.The information,washoweververyhighforabroadfrequencyregion, extendingapproximatelybetween50and70Hz.Thedistribution acrossrecordingsites ofthevalue ofthefrequency boundaryf at which information was maximal in each recording site had a median of62Hz and aninterquartile range of 53–79Hz. The informationaboutthemoviestimulusobtainedaftersplittingthe [0–250Hz]LFPrangeintotwobandsatthef=60Hzoptimal bound-arieswas1.03±0.05bits(hereandhereafter,andunlessotherwise stated,informationvaluesarereportedasmean±SEMover pop-ulation). In comparison, the information in the un-partitioned [0–250Hz] LFP power was 0.30±0.02bits. Thus, splitting the LFP response at the optimal boundary f=60Hz allowed the
extractionofmore thanthree timestheinformation carriedby theun-partitionedLFPpower.Takentogether,theseresultsclearly indicatethatthemostinformativewaytopartitiontheLFPresponse intotwobandsistoseparatelowandhighLFPfrequencieswitha boundaryplacedatapproximately55–65Hz.
Wenotedthattheinformation(Fig.3A)didnotfall monoton-icallyafterthemaximumat60Hz,butratherasecondlocalpeak waspresentatapproximately105Hz. Similarly,theredundancy (Fig.3B)reachedasecondlocalminimuminthesamefrequency region.
Tounderstandbetterthereasonswhyitwasoptimalto par-tition theLFP range by splittingit at f=60Hz, we investigated howtheredundancybetweentheinformationcarriedbythebands dependedupontheboundaryvaluef.Wefound(Fig.3B)thatthe redundancybetweenthetwobandswasingeneralsmallandwas minimalintherange50–60Hz.Theminimumwasreachedat53Hz andwas−0.05±0.004bits.ThissuggeststhatsplittingtheLFPat theoptimalboundaryrange(50–70Hz)partitionstheLFPintotwo regionswithlargelyindependent(evenweaklysynergistic) infor-mationcontentandstimulustuningproperties.Theseobservations aboutLFPbandsareconsistentwiththeresultsobtainedregarding theinformationcontentofthepowerofsingleLFPfrequencies,see Fig.1Cand(Belitskietal.,2008).
Fig. 3C reports that the information carried by the high-frequency[60–250Hz]bandwas0.69±0.04bits.Incontrast,the low frequency [0–60Hz] band carried much less information (0.29±0.02bits).Thisresult,togetherwiththeaboveinformation redundancyfindings,indicatethatthelargeamountofinformation gainedbypartitioning theLFPrangeintothehighand low fre-quencycomponentsarisesmostlybecausethispartitioningallows accessingtheinformationinthelow-powerbuthighlyinformative high-frequencyrange.Intheunpartitionedsignal,instead,the rel-ativelylowpowerofthehigh-frequencyrangeismaskedbythe highpowerofthelessinformativebutverylow-frequencyrange.
Itisinterestingtocomparetheamountofinformationcarried bythepowerofanoptimallydefinedLFPbandwiththeamount of information that can beextracted by the power at a single frequency.Wefirstcomparedtheinformationintheentirehigh frequencybandwiththeinformation intheindividual frequen-ciesinthehigh-frequencyrange.Consistentwithpreviousresults (SiegelandKönig,2003),weobservedthatintegratingLFPpower over the range [60–250Hz] greatly increased thetotal amount of information (0.69±0.04bits)compared tothehighest infor-mation carried by a single LFP frequency in the gamma range (0.31±0.02bits).Thiscanbeunderstoodbythefactthat frequen-ciesabove60Hzcarrylargelyredundantinformationwithlargely similarstimulusselectivity,high“signalcorrelation”,andalmost independenttrial-to-trialvariability,i.e.relativelylow“noise cor-relation”(Belitskietal.,2008;Magrietal.,2009).Integratingneural responses with similar stimulus selectivity and weakly corre-latednoisehasbeendemonstratedtogreatlyincreaseinformation (AbbottandDayan,1999;Orametal.,1998;Zoharyetal.,1994).We thencomparedtheinformationintheentirelowfrequencyband [0–60Hz]withtheinformationintheindividualfrequenciesinthe low-frequencyrange.Wefound(Fig.3C)thatintegratingtheLFP poweroverthelow[0–60Hz]frequencyrangeprovided informa-tion(0.292±0.015bits)comparabletothemaximuminformation obtainedforsingleLFPfrequenciesinthisrange(0.289±0.017bits; Fig.1B).Thefactthatessentiallynoinformationisgainedby inte-gratingthepowerinthelowfrequenciesislikelyduetothefact thatlowfrequencieshaveasmallredundancy(Fig.1C)duetoa verysmallsimilarityintheirtuningtothemovie(Belitskietal., 2008;Magrietal.,2009)andsummingdifferentlytunedresponses doesnotleadtoinformationgain.
Aswementionedearlier,theupperfrequencycutoffdefining theLFPrangeisanarbitraryparameternotconsistentlyusedin
theliterature.Weinvestigatedwhethertheoptimalbandsplitting dependedontheupperfrequencycutoffdefiningtheLFPbyvarying thisparameterintherange200–300Hz.Wefound(Fig.3)thatboth thevalueoftheoptimalfrequencycutoffandtheamountof infor-mationobtainedfromtheoptimallysplitLFPwerehighlystable whenvaryingthisparameter.
5.4. PartitioningofLFPresponsesintothreebands
Next,weconsideredtheproblemoffindingboundariesf1,f2 that optimally partition the LFPs into three bands, B1=[0–f1], B2=[f1–f2] and B3=[f2–250Hz]. Fig. 4A reports the informa-tioncarriedjointly bythethreefrequencyranges,computedas a function of the two boundaries parameters f1 and f2 (with 0Hz<f1<f2<250Hz)andaveragedoverthepopulation.The opti-malpartitionwasfoundatf1=54Hzandf2=97Hz.Asforthecase oftwobands,thepositionoftheinformationpeakwasrobusttothe choiceoftheupperboundaryusedfordefiningtheLFPrange(not shown).Again,wefoundthattheredundancy(Fig.4B)was negli-gibleforf1andf2intheoptimallyinformativeregion.Acrossthe populationthedistributionofthepositionoftheinformationpeaks wascentered around 52Hz (median value; interquartile range: 43–57Hz)for f2and around98Hz(medianvalue; interquartile range:92–106Hz).
Thefirstoptimalboundary(atapproximately55Hz)tosplitthe LFPrangeintothreebandsisessentiallycoincidentwiththeoptimal boundaryforsplittingtheLFPintotwobands.Thesecond opti-malboundary(at97Hz)forthethreebandpartitioncorresponds to thelocal peak (Fig.3B) observed when partitioning the LFP responseintotwobands.Thissecondoptimalboundaryseparates thehigh-frequencyrange[54–250Hz]intotworanges[54–97Hz] and[97–250Hz].Thefirstrangecorrespondstothefrequencyrange layinginsidewhatistraditionallycalledthegammarange,andis consistentwiththeoptimalgammabanddefinition[64–103Hz] obtainedforthecatvisualcortexusinganalternativeprocedure forfunctionallydefiningthisband(SiegelandKönig,2003).This alsosuggests,consistentwith(SiegelandKönig,2003),thatwidely useddefinitionofthegammabandastheregionaround40Hz(the frequencyatwhichLFPpowerpeaksinthisrange,andneural syn-chronizationisusuallymaximal)maynottobetheoptimalchoice whenconsideringstimuluscoding.Thesecondrange[97–250Hz] correspondstotherangewhichhasbeentermedthe“high-gamma” band,andwhichwasfound(RayandMaunsell,2011)tocorrelate withspikingactivity.
Thefactthatthepositionofthefirstoptimalboundaryis essen-tiallyunchanged whenpartitioning theLFPresponse intothree bandsindicatesthatthisboundaryisstableandthatitdefinesbands whicharelikelytoreflecttruedistinctneuralphenomena.Italso indicatesthatthemostimportantstep,whenpartitioningtheLFP responseaccordingtoourprocedure,istoseparatelowandhigh LFPfrequencies.Thesignificanceofthisoptimalboundaryisalso indicatedbytheextensionofthepeakoftheinformation curve averagedoverthepopulation(Fig.4A),whichisnarroweralong thef1directioncomparedtof2,indicatingasharpertuningofthe informationcurvetothefirstboundary.Additionally,thebroadness ofthef2peakisconsistentwiththeobservationthattheboundary foundfordelimitingthehighgammarangeshouldnotbethoughtof asastrictboundaryandthatthelowerandupperfrequencylimits ofthehigh-gammabandappeartobesomewhatvariable depend-ingonthetask,corticalsite,andsubject(Croneetal.,2006;Rayand Maunsell,2010).
Weobservedthatthefirstoptimalboundarywasstableinthat itappearedbothwhenpartitioningtheLFPrangeintotwoorinto threebands.Totestforthestabilityofthesecondoptimalboundary wepartitionedtherange[54–250Hz]intotwobands.The ratio-naleforconsideringthisrangeseparatelyfromthelowfrequencies
Fig.4.PartitioningofLFPresponseintothreebands.Resultsareaveragedoverasetof57V1recordingsitesfromanaesthetizedmacaques.Informationestimateswere computedusingtheGaussianMethodcorrectedwiththeGaussianbiascorrectionprocedureandusingthecuberootofthepowervalues.(A)Theinformationabouta naturalisticmoviestimuluscarriedjointlybythepowerinthethreeLFPbandsB1=[0Hz–f1],B2=[f1–f2]andB3=[f2–250Hz]asafunctionoftheboundaryparametersf1 andf2variedbetween0and250Hzwithf1<f2.Thedashedrectangleindicatestheinterquartilerangeforthepositionoftheinformationpeaksacrossthepopulation.(B)The percentageredundancybetweentheLFPpowerinthethreeLFPrangesB1,B2andB3.ThedashedrectangleindicatethesameregionboxedinpanelA.(C)Theinformation aboutanaturalisticmoviestimuluscarriedindividuallybytheLFPpowerinthebandB1=[0–54Hz],inthebandB2=[54–97Hz]andinthebandB3=[97–250Hz].Theerror barsindicatetheSEM.(D)Top:theinformationaboutanaturalisticmoviestimuluscarriedjointlybythepowerinthetwoLFPbandsB1=[54Hz–f]andB2=[f–250Hz]asa functionoftheparameterfvariedbetween54and250Hz.Bottom:theredundancybetweentheinformationcarriedbytheLFPpowerinB1andB2.Thegreyareaindicates theSEM.
isthatwehaveobserved(Figs.1Dand3B)thatLFPpowerbelow 54Hzconveysinformationwhichisindependentfromthatofthe higherfrequencies.Wefound(Fig.4D)thattheinformationwas maximalforfagainintherange[90–110Hz].Wealsofoundthat theredundancybetweentheinformationconveyedbythegamma andthehigh-gammabandswaspositivebutverysmall(reaching aminimumof3%±2%at99Hz)consistentwiththelowvalues oftheredundancy(Fig.1C)observedbetweensinglegammaand high-gammafrequencies.
Amongthebandsintheoptimalthree-bandpartition,the opti-malgammaband[54–100Hz]wastheone carryingthelargest single-band stimulusinformation (0.66±0.03bits; Fig.4C). The secondmostinformativerangewas[97–250Hz](0.61±0.04bits) followedbythelow(<54Hz)LFPfrequencies(0.29±0.02bits). 5.5. Determiningadditionaloptimalboundaries
Anissuewiththemethodproposedfordeterminingthe opti-malboundariesisthattheparameterspaceinwhichtosearchfor theoptimalboundariesincreasesexponentiallywiththenumber ofboundariesconsidered.Forexample,aspectralwindowoflength T=960mshas241Fouriercoefficientsbetween0and250Hzwith oursamplingrate.IdentifyingtheoptimalpartitionoftheLFPinto
threebandsthusrequirescomputinginformationforseveral hun-dredthousandpossiblecombinationsoftheboundaryparameters foreachrecordedchannel.Thisisdifficulttoperformsystematically withcurrentcomputationalmeans.Downsamplingthefrequency spaceisalsonotasolutiontothisproblem,asahighfrequency res-olutionbecomesmoreandmorecrucialwhenconsideringmany bands,sincetheoptimalboundariesbecomecloserandthusharder todiscriminate.
InordertoassesstheutilityofafurtherpartitionoftheLFP spec-trumintofourbands,wefollowedaslightlydifferentapproach: wefixedthetwopreviouslyobtainedprincipalbandboundaries and wecomputed theoptimalwaytofurthersplit each ofthe threeprincipalbands,ratherthanperformingabrute-forcesearch acrosstheentirefour-dimensionalfrequencyspace.Thischoice wasjustifiedbyourfindingsthat theoptimalboundaries at54 and97Hz(whichwecalltheprincipalboundaries)arestablewith respectbothtochangesintheparametersoftheanalysisandto arefinementofthepartition,andthatthethreeprincipalbands ([0–54Hz],[54–97Hz]and[97–250Hz])conveylargely indepen-dentinformationand,consequently,theirfurtherrefiningcanbe studiedindependentlyoftheothers.In whatfollows,the infor-mationgainedbyfurthersplittingabandwasquantifiedasthe differencebetweentheinformationcarriedbythepartitionofthe
Fig.5. PartitioningtheLFPintofourbands.Resultsareaveragedoverasetof 57V1recordingsitesfromanaesthetizedmacaques.Informationestimateswere computedusingtheGaussianMethodcorrectedwiththeGaussianbiascorrection procedureandusingthecuberootofthepowervalues.Thesolidlinesindicatethe averageoverallavailablerecordingsandthegreyareasindicatestheSEM.(A)The informationgainaboutanaturalisticmoviestimulusobtainedwhenpartitioning theLFPrange[0–54Hz]intotwobandsB1=[0Hz–f]andB2=[f–54Hz]asafunction oftheboundaryparameterf.Therighty-axisexpressesthegainasthepercentage oftheinformationconveyedbytheun-partitionedband.(B)Thepercentage redun-dancybetweentheinformationcarriedbythepowerintheLFPbandsB1=[0Hz–f] andB2=[f–54Hz]asafunctionoftheboundaryparameterf.(C)Sameplotasin panelAbutforapartitionoftheband[54–97Hz].(D)SameplotasinpanelBbut forapartitionoftheband[54–97Hz].(E)SameplotasinpanelAbutforapartition oftheband[97–250Hz].(F)SameplotasinpanelBbutforapartitionoftheband [97–250Hz].
selectedbandandtheinformationcarriedbytheun-partitioned band.Thisinformationgainwasexpressedeitherasanabsolute difference(inbits)betweenthesetwoterms,orwasnormalized aspercentagegainwithrespecttotheinformationcarriedbythe un-partitionedband.
Wefirstconsideredhowtosplitthe[0–54Hz]low-frequency range. We found(Fig.5A) thatthe information gain wassmall whentheboundarybetweenthetwo sub-bandswassetbelow 15Hz but that itincreased rapidlyreachinga globalmaximum of0.32±0.03bitsat27Hz,correspondingtoaninformationgain of111%±11%withrespecttotheinformationcarriedbythe un-partitionedband.Thisoptimalsplitat27Hzcorrespondsroughly topartitioningthelowfrequencyrangeintoastimulus-informative [0–27Hz]and tothestimulus-unrelatedfrequencies [27–50Hz] band(see thesinglefrequency informationanalysisreportedin Fig.1Bandin(Belitskietal.,2008;Magrietal.,2009)).Theoverall informationgainofthefurtherpartitionofthe[0–54Hz]bandcan beconceptualizedashelpingisolatingthe“noisy”frequenciesfrom thestimulus-evokedones.
We then considered how best to sub-partition the gamma [54–97Hz] band into two sub-bands. Fig. 5C shows that the optimalsplitwasobtainedusingaboundaryat73Hz.The infor-mation gain of this optimal split over the information in the wholebandwas0.35±0.06bits(correspondingto53%±8%more information).Thus,afurthersplitofthegammarangewas worth-whilebecauseitincreasedtheinformation,althoughwithaless
importantproportionalgainwithrespecttotheoneobtainedby furtherpartitioningthelowfrequencyrange.Thefactthatthe par-titionofthegammarangegavealowerproportionalincreasecanbe understoodbyobservingthattheoptimallysplitsub-rangeswithin thegammafrequency domainwere stillalmost 18%redundant (Fig.5D), suggesting that the division at 73Hz separates simi-larfrequencyregionswithaslightlydifferenttuningratherthan identifyingregionswhichqualitativelydifferentstimuluscoding properties.
The smallestinformation gain (bothin absoluteand in pro-portionalterms)wasobtainedwhenpartitioningthehigh-gamma [97–250Hz]range,Fig.5E.Theoptimalsplitofthehigh-gamma rangewasachievedwithaboundaryat111Hz,butitledtoonly asmall(0.16±0.05bits,correspondingto26%±8%)information gain, indicating that littleadditionalinformation can begained byadditionallypartitioningthehighfrequencies.Thisfindingis furthersupportedbytheveryhighvaluesofredundancy(Fig.5F) obtainedforanychoiceoftheboundary.
Theseresultssuggestthatthemostconvenientwayofadding athirdoptimalboundaryistopartitionthelowfrequencyrange intoa [0–27Hz]bandand a[27–54Hzrange]since considering thesetwobandsseparatelyprovidesaproportionallylargegainin informationanditseparatesregionswithaqualitativelydifferent relationtothevisualstimulus.
5.6. Distributionofoptimalbandboundariesacrosssitesand animals
IntheabovesectionswepartitionedtheLFPsintooptimalbands usinginformationvaluesaveragedoverallavailablesitesand mon-keys.PreviousworkhasshownthattheLFPspectrumcanchange dependingonfactorssuchasthedetailsofthestimulusused(Ray andMaunsell,2010),thetask(Friesetal.,2001)orrecordingdepth (Maieretal.,2011).Inparticular,itwasshownthatgammaactivity canvarysignificantlyinpowerandpeakfrequencyacrosssubjects andrecordingsite(Limaetal.,2010;Muthukumaraswamyetal., 2010).Hereweinvestigatetheresultsobtainedbyapplyingour partitioningtechniqueindependentlyforeachrecordingchannel andforeachmonkey.
Results of the single-site two-bands optimal partition are reportedinFig.6B.Wefoundthatthemethodwasabletofind optimalboundariesalsoatthesinglechannellevel.Thepositionof theoptimalboundaryforthetwo-bandspartitionhadamedianof 62Hz(range45–100Hz)forthefirstmonkeyandof45Hz(range 33–69Hz)forthesecondmonkey.Thedistributionofthe bound-ariesinthefirstmonkeywassignificantlyhigherthanthatofthe secondmonkey(p<0.05;Wilcoxonranksumtest).Althoughthe limitednumber ofsubjectsusedinthestudydoesnotallowto perform anexhaustive analysisof thedependency of theband boundariesonthespectralpropertiesofeachanimal,itis tempt-ingtosuggestthatthedifferenceinthedistributionofthefirst optimalboundarybetweenthetwomonkeysmaybeattributedto themuchlargergammapowerobservedinspectrumofthefirst monkey(Fig.6A).
Furthermore,whenpartitioningtheLFPrangeintothreebands independently for each siteof thefirst monkey,we foundthat thefirstoptimalboundarywasdistributedbetween32and63Hz withamedianof54Hzandthatthesecondoptimalboundarywas between74and118Hzwitha medianof98Hz.For thesecond monkeythefirstboundarywasbetween32and49Hz(medianof 38Hz),comparabletotherangeobtainedwhenpartitioningthe LFPsrecordedfromthismonkeyintotwobands(Fig.6B),andthe secondboundarywasbetween79and147Hz(medianof127Hz). Itisimportanttonotethatthepartitioningalgorithmdetermined thatthefirstboundarywaspreservedwhenrefiningthepartition fromtwotothreebandsevenatthesinglerecordingsitelevel,and
Fig.6.Distributionoftheoptimalboundariesacrosssitesandanimals.Resultsareshownforeachofthetwomonkeysusedinthisstudy.Quantitiesplottedingreyreferto monkey1,quantitiesplottedinblacktomonkey2.(A)AveragepowerspectrumoftheLFPsrecordedduringthepresentationofanaturalisticmovie.(B)Distributionofthe optimalboundariesobtainedforeachrecordingsitewhenpartitioningtheLFPsintotwobands.(C)Distributionofthefirstandsecondoptimalboundariesobtainedforeach recordingsitewhenpartitioningtheLFPsintothreebands.
notonlyatthepopulationlevel.Thissuggeststhatouralgorithmis robustenoughtoanalyzeandpartitionsinglecases,andnotonly grandpopulationaverages.
6. Discussion
WedevelopedanewprocedureforpartitioningtheLFPresponse intoaspecifiednumberofbands,whichopensthewayforamore objective,semi-automaticanalysisoftheroleofcortical oscilla-toryactivity in sensory function. The methodselects theband boundariesthatmaximizetheinformationaboutasetof exter-nalcorrelatescarriedjointlybyallbandsinthepartition.Weused thisproceduretodetermineamaximallyinformativepartitioning ofprimaryvisualcorticalLFPsintotwotofourbands,and iden-tifiedbandboundarieswhicharecompatiblewithourknowledge andintuitionaboutthefunctionalLFPspectruminvisualcortex.It isimportanttonotethatourmethod,thoughexemplifiedforLFPs, canbereadilyappliedtoa varietyofbroad-bandneuralsignals, fromintracellularrecordingsofmembranepotentialfluctuationsto populationspikingactivityortonon-invasiveneuroimagingsignals suchasEEG,magnetoencephalography(MEG)andfunctional mag-neticresonanceimaging(fMRI).Ourmethodcanthereforebecome ausefultoolfortheendeavorofextractinginformationfromthese signals(Alendaetal.,2010;FuhrmannAlpertetal.,2007;Ostwald etal.,2010;Panzerietal.,2008;QuirogaandPanzeri,2009;Schyns etal.,2011).
Theimplicationsofboththemethodologicaladvancesandof theneurophysiologicalresultsarediscussedinthefollowing.
6.1. Potentialapplicationsofmethodsforpartitioningneural responsesintomaximallyinformativebands
Asillustrated by our application to visualcortical LFPs, our methodispotentiallyrelevantforsensoryphysiology.The spec-trumofLFPoscillationsandfluctuationsinresponsetoastimulus isoftenbroadandlacksaclearseparationbetweenspectralregions tunedtodifferentstimulusfeatures.TherelationshipbetweenLFPs andstimuliisparticularlydifficulttountanglewhenconsidering complexstimulimadeofmanyfeaturesvaryingatdifferenttime scales,suchasforexamplenaturalisticmoviesornaturalsounds (KayserandKonig,2004;Kayseretal.,2009).Understandinghow topartitiontheLFPintoaspecificnumberofbandsthatare col-lectivelymaximallyinformativeaboutthestimulusshedslighton differencesinstimulustuningofdistinctLFPfrequencyregions,and helpsindividuatingfrequencyregionsthatmustbeconsidered sep-aratelybecausetheycarrycomplementaryinformationaboutthe externalcorrelates.Beingabletoindividuateobjectivelyandalmost automaticallytheoptimaldefinitionsofsuchbandswillalso facil-itatehomogeneityofanalysisacrossfuturestudiesandwillmake itiseasierandmoremeaningfultocomparedifferentstudiesor preparations.
Althoughherewefocusedonmaximizingtheinformationabout anexternalcorrelate,ourmethodcouldbereadilyusedto deter-minetheoptimalpartitionofbroadbandneuralsignalsintobands whicharemaximallyinformativeaboutinternal(ratherthan exter-nal) correlates. For example, our procedure could be used to determineasetofLFPregressorsprovidinganoptimalprediction oftheBOLDfMRI.
Finally, determiningthe partitions of theLFPspectra which aremaximallyinformativeaboutsensorystimuliiscrucialforthe developmentofbrainmachineinterfaces(Andersenetal.,2004; Donoghueetal.,1998).TheLFPisaparticularlysuitedneural sig-nalforBMIsbecausetheyhavethepotentialtoprolongthelifetime ofelectrodeimplantsandtoimprovedecodingperformancewhen combinedwithspikes(Andersenetal.,2004;Belitskietal.,2008).It iswidelyrecognizedthatthemainbottlenecktotheperformanceof BMIsistherelativelysmallamountofinformationthatweare cur-rentlyabletoextractfromneuralactivity(Donoghueetal.,1998). Ourmethodprovidesatoolformaximizingtheinformationabout externalcorrelates(suchas,forexample,movementdirection)thus potentiallyenlargingbottlenecksinperformance.
6.2. Significanceofthemethodologicaladvances
Onemainadvantageofusinginformationasameasureofthe relationshipbetweenthepowerofthebandpartitionandthe exter-nalcorrelateisthatinformationcapturesalltypesofrelationships (linearandnon-linearandofanyorder).Additionally,by consider-ingtheinformationconveyedsimultaneouslybythepowerinall bands,ourmethoddoesnotonlytakeintoaccountthe relation-shipbetweeneachindividualbandandtheexternalcorrelate,but alsotherelationshipbetweenthedifferentbandsinthepartition. Thesefactorscannotbetakenintoaccountbysingle-frequencyor single-bandanalyses.
Wealsoconsideredthepracticalproblemsinvolvedinthe appli-cation of our methodto empirical neurophysiological datasets. To alleviate the bias problem arising from the limited size of thedatasets thatitisnormallypossibletocollect, weproposed a GaussianMethodand Gaussian biascorrectionforcomputing information.WevalidatedthismethodonvisualcorticalLFPsand demonstratedthat,when oneortwobandsareconsidered, dif-ferencesbetweentheinformation estimatesobtainedusingthe GaussianMethodandthoseobtainedwiththeDirectMethodstem fromthediscretizationusedfortheDirectMethod.Thisresult indi-catesthattheGaussianMethod-basedprocedurethatwepropose canbesuccessfullyappliedtocomputetheinformationconveyed bythepowerinthepartitionoftheLFPresponse.Asecond prac-tical problemis that of implementing thebias corrections and estimationprocedurerequiredfortheproperestimationof infor-mationfromthedata.Wedevelopedafasttoolbox(Magrietal., 2009),whichincludedbothDirectMethodandGaussian compu-tation and canthus be usedto implement and tovalidate our procedure,andmadeitpubliclyavailable(www.ibtb.org).Athird practicalproblemis thatof computationaltime.Besides imple-mentingafasttoolbox,weaddressedthisproblembyproposinga procedureforincrementallyrefiningthepartitionbasedonfurther splittingoptimalbands.Thiscansaveagreatdealofcomputing time whenneedingtopartition theLFPintoa largenumber of bands.Thisapproachisjustifiedbytwokeyfindings:the princi-palbandboundariesarestabletorefinementofthepartition,and optimalpartitionsinmostcasescorrespondtosplitsintolargely independentbands.
Thepartitioningmethodproposedinthisworkalsoprovidesa straightforwardwaytoquantitativelyevaluatetherelativegainof addingextrabandstothepartition.Thiscanbedonebycomparing theinformationobtainedforagivennumberofbandswiththat gainedbyintroducingoneextraband.Byevaluatingthestatistical significanceoftheinformationincreasewhenaddingextrabands, thismethodcouldbeextendedtodeterminethesmallestnumber ofbandsthatneedtobeusedtodescribeallstimulusinformation availableintheLFP. However,giventherichnessand complex-ityofLFPsrecordedinresponsetocomplexnaturalisticstimuli, wefeelthatitmaynotbepossibletodescribealltheinformation
contentofLFPsusingonlyaverysmallnumberofbandssuchas thatconsideredintheaboveanalysis.
Theaboveconsiderations,aswellasthelargenumberof differ-entbandsandpartitionsproposedintheneurophysiologicalandin theneuroimagingliterature,raisethequestionofhowtoevaluate theinformationcontentofanumberofbandsmuchlargerthanthe handfulconsideredhere.Boththebiasoftheinformation calcu-lationandthedifficultyoftheevaluationofitssignificancegrow rapidlywiththecardinality ofthespaceinwhichthe stimulus-responseprobabilitiesaredefined,inthisstudywiththenumber ofbandsincludedintheanalysis(Inceetal.,inpress).Evaluation oftheexactinformationcontentofalargenumberofbands(ofthe orderoftenormore)requireseithercollectinglargerdatasetsor developingaccuratestimulusresponsemodelsdescribedbyeven less parameters thantheones consideredhere.We note, how-ever,thattheinformationbiasofthemethodconsideredhere(Eqs. (6) and (7))depends upon thenumber of bands but is largely independentoftheexactbandboundaries.Thismeansthat the partitioningmethodconsideredheremaybestillusefulto deter-minetheboundariesforoptimalpartitionintolargernumberof bands,althoughinsuchcaseitmaynotallowtoevaluatetheprecise informationcontentoftheoptimalpartition.
6.3. Theoptimalbandpartitionsdescribingvisualprimary corticalencodingofnaturalisticinformation
Weusedourmethodtocomputetheoptimallyinformativeband partitionsofLFPsrecordedinV1ofanesthetizedduring presenta-tionofnaturalisticmovies.
Thefirst,andmostimportant,optimalboundarythatappeared inourpartitionwasatapproximately60Hz, andseparatedlow [0–60Hz]andahigh[60–250Hz]LFPfrequencies.Thefindingthat this is the chief boundaryis consistentwithprevious analyses (Belitskiet al.,2008; Magrietal., 2009)reportingthatthe fre-quenciesabove50–60Hzarealmostcompletelyuncorrelatedin bothsignalandnoisetofrequenciesbelowthiscutoff.Thelarge amountofinformationgainedover theunpartitioned LFPwhen splittingtheLFPsatthisfrequencylendssupporttothehypothesis thatthelow-andthehigh-frequencyrangesconveyindependent informationaboutthestimulusbecausetheyoriginatefrom dif-ferentneuralpathways.Inparticular,theoreticalandexperimental studiessuggestedthatlowLFPfrequenciesreflectentrainmentof localneuralactivitytothelowfrequencycomponentsintheinput (Chandrasekaranetal.,2010;Lakatosetal.,2008;Mazzonietal., 2008)whereashighLFPfrequenciesinthegammarangeandabove conveyinformationaboutthestrengthoftheinputbecausethe lat-termodulatesthelocallygeneratedrhythms(BrunelandWang, 2003;Henrieand Shapley,2005;Mazzonietal., 2008;Rayand Maunsell,2010).
Wefoundasecondoptimalboundaryatapproximately100Hz separating the high-frequency LFP band into two ranges cor-respondingto thegamma[60–100Hz]and to thehigh-gamma [100–250Hz]band, leadingtoa largeincrease (approx.30%)in theamountofinformationthatwecanextractaboutthemovie stimuluscomparedtothecaseinwhichonlytwobandsare con-sidered. Gammaoscillationsare thoughttooriginatetoa large extentfromtherecurrentinteractionsamonginhibitoryneurons andamongexcitatoryandinhibitoryneurons(Bartosetal.,2007; BrunelandWang,2003).High-gammapowerhasbeenproposed tooriginatepartlyfrombroadbandLFPactivityandpartly from briefburstsofpowerassociatedwithspikesgeneratednearthe electrode (the socalled“spike bleed-through”).In some condi-tions,forexamplewhenvaryingcontrast,gamma,high-gammaand spikingactivityarelargelycorrelatedandcarrysimilar informa-tionaboutthestimulusparameters.However,inotherconditions, for examplewhen varyingthe stimulussize,gammaactivityis
partiallydecoupledandhasadifferentstimulusselectivitythan thatofhighgammaandspikingactivity,whichremainhighly cor-relatedinmostconditions(GieselmannandThiele,2008;Rayand Maunsell,2011).Ourfindingthatthesplitbetweengammaand highgammafrequencies atapproximately100Hz isthesecond mostimportantsplittomaximizeinformationextractionfromthe data,supportsthehypothesisthatgammarhythmandhigh-gamma activityreflectpartlydifferentneuralphenomena,andhighlights theimportanceofdistinguishingandstudyingseparatelythesetwo frequencyrangeswheninvestigatingstimulusselectivityofcortical activity.
Wealsofoundthataddingathirdboundaryatapproximately 25Hzledtoaconsiderablegaininthestimulus-informationthat couldbeextractedfromthelowLFPfrequencies.Thissplitdivides thelowfrequencyLFPrangeintotwoqualitativelydifferentparts: a stimulus-modulatedpart and a stimulusindependent part.A highinformation gain wasobtainedalsowhenfurthersplitting thegammarange[50–100Hz]atapproximately70Hz.Inthiscase, however,theredundancy betweenthetwo sub-bands wasstill considerable.Thissuggeststhattheinformation gainedbyfiner partitionof thegammarangeresultsfromisolating partofthe spectrumoriginatingfrom thesameneuralphenomenon (most likely recurrent inhibitory–inhibitory and excitatory–inhibitory interactions)withslightlydifferenttuningtothestimulus.Thisis compatiblewiththeoreticalmodelsthatpredictthatthepeak fre-quency,thewidthandthestimulusmodulationoftheoscillation spectrumallchangewiththestrengthoftheinputtothenetwork (BrunelandWang,2003;Mazzonietal.,2008).Accordingtothis model,furtherpartitioningthegammarangewouldallow discrim-inatingthesefinerchangesinLFPsinresponsetothestimuli,hence theinformationincreasedespitethepresenceofredundancy. Acknowledgements
ThisworkwassupportedbytheBMIprojectofIIT,bytheMax PlanckSociety,bytheCompagniadiSanPaolo,and waspartof theresearchprogramoftheBernsteinCenterforComputational Neuroscience,Tübingen,fundedbytheGermanFederalMinistryof EducationandResearch(BMBF;FKZ:01GQ1002).
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