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Ictalurus punctatus calpain-1 catalytic subunit mRNA, complete cds
GenBank: JQ609296.1 FASTA Graphics
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LOCUS JQ609296 3612 bp mRNA linear VRT 29-MAR-2013 DEFINITION Ictalurus punctatus calpain-1 catalytic subunit mRNA, complete cds.
ACCESSION JQ609296
VERSION JQ609296.1 GI:407378313 KEYWORDS .
SOURCE Ictalurus punctatus (channel catfish) ORGANISM Ictalurus punctatus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
Ictaluridae; Ictalurus.
REFERENCE 1 (bases 1 to 3612)
AUTHORS Preziosa,E., Liu,S., Terova,G., Gao,X., Liu,H., Kucuktas,H., Terhune,J. and Liu,Z.
TITLE Effect of Nutrient Restriction and Re-Feeding on Calpain Family Genes in Skeletal Muscle of Channel Catfish (Ictalurus punctatus) JOURNAL PLoS ONE 8 (3), E59404 (2013)
PUBMED 23527186
REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3612)
AUTHORS Preziosa,E., Liu,S., Gao,X., Liu,H., Kucuktas,H., Terova,G. and Liu,Z.
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2012) Fisheries and Allied Aquacultures, Auburn University, 203 Swingle hall, Auburn, AL 36849, USA
FEATURES Location/Qualifiers
source 1..3612
/organism="Ictalurus punctatus"
/mol_type="mRNA"
/db_xref="taxon:7998"
CDS 295..2409 /codon_start=1
/product="calpain-1 catalytic subunit"
/protein_id="AFU11025.1"
/db_xref="GI:407378314"
/translation="MEPIYATGVAAKLRSQWDRNEGLGQNYNAVKFLGQDYEMLRAQC LQSRTLFEDSYFPATASSLGFNELGPRSSKTSGVRWMRPPEICSRPQFITQGATRTDI CQGALGDCWLLAAIASLTLNDNLLHRVVPHGQSFSEGYAGIFHFQFWQFGEWVDVVID DRLPFKDGKLLFVHSAEGGEFWSALVEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTE MYELSKPPADLYTIIKRAVERGSLLGCSIDISNTRDMEAVTFKKLVKGHAYSVTGVEE VNFRGTPTKLVRIRNPWGEVEWTGAWSDNAREWDSVDPSTRSKLNNRSEDGEFWMSFQ DFLREYSRLEICNLTADALEASQIKKWSTSLYQGEWRRGSTAGGCRNYPATFWINPQF KINLKIPDSAGKNDCTFLVALMQKDRRKQRKEGKDMETIGFAVYEVPSEFVGQPAVHL KRDYFITHGSSARSETFINLREVSSRLRLPVGEYIIVPSTFEPQKEANFVLRVFSEKP ADSVELDDEVKADLPKVNYLAESQIDAGFKGLFRQLAGADMEISVTELQTILNRIISK HKDLKTDGFTQEACRSMINLMDVDGSGKLGLTEFHVLWEKIKQYLEVFRKFDVDKSGT MSSYELRMALESAGIKLNNHIFQLIILRYAEQDLTVDFDNFVCCLVRLETMFKTFYTL DTDTDGIISLDFNQWLSLTMFV"
ORIGIN
1 agggcggttc tgacagcagg gcttcacgtt ggtggtgtgg aaatctctgg atgggactat 61 aaaacctaaa actctttatt actaacgctt ttgttcaggg aagtgaagca gaaaggcttg 121 ggaccagcct tcaccttttt caccacatga gccagcttcc accctttcct tcactcttca 181 atccctaaaa cagtgactgg gccatccgga tcctcattgg cttaaccttg cccagcctac
2
241 tgtgttgtca actcttaacg taaatttttt ggacatctcg gatctgcggc agtcatggag 301 cccatttacg ctacgggagt ggcagccaag ctgcgcagtc agtgggaccg aaatgaaggc 361 ttgggccaga actataatgc tgtcaagttt ttggggcagg actacgagat gcttagggcg 421 cagtgcctcc agagcaggac cttgtttgag gactcctact tccctgccac tgcctcttct 481 ctgggcttta atgagctcgg accccgctcc tccaaaacga gtggtgtacg ctggatgagg 541 ccaccggaga tctgctctcg tccccagttc atcacgcaag gagccacacg cacagatatc 601 tgtcagggag cactgggtga ttgttggctg ctggctgcta ttgcatctct cactcttaat 661 gataatctgc tgcaccgtgt ggttccacat ggacagagtt tcagcgaggg ctatgctggt 721 atctttcact tccagttctg gcagtttggt gagtgggttg atgtggtgat tgacgacagg 781 ctgccgttta aagacgggaa gctgctgttc gtgcactcgg cggagggcgg cgagttctgg 841 agcgctctgg tggaaaaggc ctacgccaag ctgaacggct gctacgaggc cttgtcaggc 901 ggcagtacgt cagaaggctt tgaggacttc acgggtggtg tgacggagat gtacgagctg 961 agcaaacctc ccgctgatct ttacaccatc ataaagaggg ccgtggagag aggatctctg 1021 ctgggctgct ccatagatat cagcaatact cgtgacatgg aggccgtcac cttcaagaaa 1081 ctggttaaag gccacgccta ctctgtgaca ggagtggaag aggtgaattt cagaggaacc 1141 cccaccaagc tggttcgcat cagaaacccc tggggagagg tggagtggac tggagcttgg 1201 agcgataatg ctagagagtg ggacagtgtg gacccgtcca ccaggagcaa actgaataac 1261 cgcagcgagg acggagagtt ctggatgtcg ttccaggact tcctgcgaga gtacagtagg 1321 ttggagatct gtaacctgac agcggatgct ctggaagcca gtcagataaa gaagtggagc 1381 acatcactct accagggcga gtggaggaga ggtagcacgg ctggaggctg caggaactac 1441 ccagctacat tttggatcaa ccctcagttc aagatcaacc tgaagatccc ggattcggca 1501 ggaaagaacg actgcacctt cctggtggct ctgatgcaga aagaccgcag gaaacagcgc 1561 aaagagggca aagatatgga gaccatcggc ttcgcagtgt acgaggttcc cagtgagttt 1621 gtaggtcagc cagcagttca cctgaagcga gattatttca tcacacacgg ctccagcgct 1681 cgctctgaga ccttcatcaa cctgcgtgag gtcagctcac gcctccgcct acctgttgga 1741 gagtacatca ttgtcccgtc cacgtttgag ccacagaaag aagccaactt tgtgctgcgt 1801 gtcttctctg aaaaacccgc tgactctgtg gaattggatg acgaagtcaa agctgatctt 1861 cccaaagtga attatttggc tgagagccaa attgatgctg gattcaaggg tctgttcaga 1921 cagctggcag gagcggacat ggagatcagt gttacagagc tccagaccat tctgaacaga 1981 atcatcagca agcataagga tctgaagaca gacggcttta cccaggaggc gtgccgcagt 2041 atgatcaacc tcatggacgt agatggcagt ggtaagctgg gtctcacaga gttccacgtg 2101 ctgtgggaga aaatcaaaca gtatctggaa gtgttcagga agtttgatgt ggacaagtct 2161 ggcacaatga gctcatatga actgcgtatg gccctcgaat cagcaggcat caagctgaac 2221 aaccatatat tccagctgat tattctgcgc tacgcagagc aggacctgac cgttgacttt 2281 gacaacttcg tctgctgtct agtgcgtctg gagaccatgt tcaagacatt ttacacttta 2341 gacaccgaca ctgatggaat catctcccta gacttcaacc agtggctatc actgactatg 2401 tttgtgtaaa cagacggaca tctggatgcc tggatgcttg cactgtgacc cacatctccc 2461 tccgtctggt ccagaagtgc cttcttcata ttgtttatta ttattgctca aggtgatggt 2521 attcaatcag tattttactc ctgtctctct ctttttaaag gtgtactggt ttaaggagtg 2581 tttaaagggt ttacgctgta ctgagtcata taaaaagcca cttcctgttc tttgtgacct 2641 ttacccatat gccaaaaaca gtaagccaca gtctgagaag aacacagtat atgtaaagtc 2701 atcaatctcg gcctgtaaaa atgcctgaca gtgtagtgtt tacatcctct ctgaccagcc 2761 atgtgtcggc aatcatactt ttcgtaacag ataggactct gaacctttct atgttgtcaa 2821 atatggctgt ttttacttcc tctgccaaat ggatcacttc ttctcaatcc taatctatca 2881 atcaattcca gttcagactg catcacgatg tatatgagga atcttcaagg attttactga 2941 tgcttgactt taaggtctct gtaattgaca ttatttaaca tgaacaaacc aggaacctca 3001 gcattattac accataaata acttctgtta actaataatc atactatcac tgagtaaaat 3061 gaattccaca gtgaccaaca taaacagcac cttaatgaac aagttttcag aactgtggct 3121 gaaaagcaag gtccgatgtt tacacctgga gaccagcttt caggacattt tcaacattac 3181 atttagctaa tttatccgga tttgttttta attggggtct gaataaacat tactcaatgc 3241 aagtgtactc agttaagtta ttttttttta acattacttg tggtttattg ttactgatgt 3301 taatggttgg ttcatgttaa ctaatgcagt aagtaaagta acttaaggga gcgttaatat 3361 caagtgattg ttttttattg tctgtgtgtg tatgtgcatg ctgttgaaaa cagtctgaat 3421 atataacatt tgatttatat aaataaaata atacatgtct gtagttttag gctatgtaac 3481 gcaaaacctg catgaaccgt gattcttggg aatctggact atctgggaac ttgggtgcca 3541 ttaagttttt gtttgtttgt ttgtttgttt gttgttttgt ttttggccag gaatgtgtaa 3601 agaaaaaaaa aa
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