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Bombyx mori ATG1 transcript variant B mRNA, complete cds, alternatively spliced. NCBI (http://www.ncbi.nlm.nih.gov/nuccore/), Genebank accession number: JN565289

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21/10/13 10.03 Bombyx mori ATG1 transcript variant B mRNA, complete cds, alternativel - Nucleotide - NCBI

Pagina 1 di 2 http://www.ncbi.nlm.nih.gov/nuccore/JN565289.1

Bombyx mori ATG1 transcript variant B mRNA, complete cds, alternatively spliced

GenBank: JN565289.1 FASTA Graphics PopSet Go to:

LOCUS JN565289 2279 bp mRNA linear INV 13-NOV-2012 DEFINITION Bombyx mori ATG1 transcript variant B mRNA, complete cds,

alternatively spliced.

ACCESSION JN565289

VERSION JN565289.1 GI:381393199 KEYWORDS .

SOURCE Bombyx mori (domestic silkworm) ORGANISM Bombyx mori

Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;

Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;

Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx.

REFERENCE 1 (bases 1 to 2279)

AUTHORS Casati,B., Terova,G., Cattaneo,A.G., Rimoldi,S., Franzetti,E., de Eguileor,M. and Tettamanti,G.

TITLE Molecular cloning, characterization and expression analysis of ATG1 in the silkworm, Bombyx mori

JOURNAL Gene 511 (2), 326-337 (2012) PUBMED 23041082

REFERENCE 2 (bases 1 to 2279)

AUTHORS Casati,B., Rimoldi,S., Terova,G. and Tettamanti,G.

TITLE Direct Submission

JOURNAL Submitted (09-AUG-2011) Biotechnology and Life Sciences, University of Insubria, Via J.H. Dunant, 3, Varese, VA 21100, Italy

FEATURES Location/Qualifiers source 1..2279

/organism="Bombyx mori"

/mol_type="mRNA"

/db_xref="taxon:7091"

/cell_line="NIAS-Bm-aff3"

CDS 6..2276

/note="BmATG1; alternatively spliced"

/codon_start=1

/product="ATG1 transcript variant B"

/protein_id="AFG28422.1"

/db_xref="GI:381393200"

/translation="MSVVKGKLVKMEVIQVGDYEFTKQDIIGHGAFAMVYKGRKRKNP SQSVAVKVVTKKGIQKASEILVKEIKILRELTALQHKNLVAMHDCMDSPAYVYVVMEY CNGGDLADYLQTNRLLSETTIQLFLAQLAEAMSAIHAKGIVHRDLKPQNILLTHSILP PRTPHPSDITLKIADFGFARFLEEGNMAVTLCGSPMYMAPEVIMSLKYDAKADLWSLG TIVYQCLTGKAPFQATTPHELKAFYENSVDLQPKIPPGTSPELCSLLIGLLRRNPRER MSFEMFFNHPFLQRSRNTNVPSLDSDLPVILESNLESRPDTNCCYLQESWESQEMGSC AGPSVVANRAPPSRATPPAPLPLALPTAKKTQPTSSDSSEVGWAGEEDFVLVEATESG SAECSAASSGSEAASRPRSLALPAPPAPASPCTPTASPLTAATNTTVPRSQPIDVRRT TYSRNATNIGSLSPPTMPFAMGTPPSTRRRSSNSGSSPPPQLWQVSPTNASPLRRSGW PAAGSSPPSALALRASGECGGGAGGALGDVLRGMKPDPPVYIPNLQEETILAEEHSKV SSQLNFVLMLAELLSDLAVSCGAPIAALMDTSDERCNESVRLGLMVQAMQALAAGLRL AATHYRARTLQPTPQVRSVVSLMNGKYKWIVNESKRLHEAGVTPAVCDKILYEHAIEL CQMAAIEELFGDTKECERRYMSAQVLLHSLVQRHPLHPHHRTTLSKYRDAVQRRLNCL KGVRKIMDVKIEAGIS"

ORIGIN

1 gaatcatgtc cgtggttaag ggaaaattag tgaaaatgga agttatccaa gtcggtgatt 61 acgagttcac taaacaagat ataattggac atggtgcttt tgcgatggtc tacaaaggaa 121 ggaagagaaa gaatccgtcc cagtctgttg cggtgaaggt ggtcacaaag aaaggcatcc 181 agaaagcgtc agagatactc gtgaaagaga ttaagatact acgtgaattg acagctctgc 241 aacacaaaaa cctggtcgcg atgcacgact gcatggacag ccccgcctat gtctatgttg 301 tcatggagta ctgcaatgga ggcgacctag cggattatct tcaaacgaac cggctgctca 361 gcgagaccac gatccagttg ttcttagcgc agcttgcaga agcgatgagc gccatccacg 421 cgaagggcat cgtccaccgt gacttgaagc cgcaaaacat actcctcact cattctatcc 481 taccgcctcg tactccacac ccatcagata ttacactcaa aattgctgac ttcggattcg 541 caaggttcct ggaagaagga aatatggccg ttacgctctg cggctcccca atgtacatgg 601 ctccagaagt cataatgtcc ctgaaatacg acgctaaagc agacctgtgg agcctcggca 661 caatagtcta ccagtgcctt accgggaagg ctcccttcca agccaccaca ccacacgaac 721 tgaaagcttt ctatgaaaat agcgtcgatc ttcagcccaa aatcccacca ggaacgagtc 781 cagaactgtg cagcttattg attggcctac ttcgacgaaa ccctcgagaa cgcatgtcat 841 tcgaaatgtt cttcaatcat ccctttcttc aacgatcgcg caatacaaac gtccccagtt 901 tagattcgga tcttcccgtt atattggaga gcaatctcga gagtcgaccc gatactaact

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GenBank

Nucleotide

(2)

21/10/13 10.03 Bombyx mori ATG1 transcript variant B mRNA, complete cds, alternativel - Nucleotide - NCBI

Pagina 2 di 2 http://www.ncbi.nlm.nih.gov/nuccore/JN565289.1

961 gttgttacct acaggagtcg tgggagagcc aggagatggg atcgtgtgcg ggtccgtccg

1021 tggtggcgaa ccgagcgccc ccctcccgcg ccaccccgcc cgcgcccctg cccctagcct

1081 tacccactgc caagaaaaca cagccaacat cctccgattc gtcggaggtt ggttgggcgg

1141 gtgaagagga ctttgtgttg gtggaggcga cggagagcgg gtccgcagag tgctcggccg

1201 cctcctccgg ctcggaggct gcgtcccgac cccgctccct ggcgctcccc gcgccccccg

1261 cacccgcctc cccttgcaca cctaccgcga gcccactgac cgcggccact aacactactg

1321 taccgcgatc tcagcccatc gacgtgcgcc gaacgaccta cagccgcaac gccacgaaca

1381 tcggctcgct ctcgccgccc actatgccgt tcgcgatggg cacgccgccg tcgacgcggc

1441 gtcgcagcag caacagcggc agctccccgc cgccgcagct gtggcaggtg tcgccgacca

1501 acgcgagccc gctgcgcagg tccggctggc cggccgcagg ctcgtccccg cccagtgcgc

1561 tggcgctgcg tgcgagcggg gagtgcgggg gcggcgcggg gggcgcgctc ggcgacgtgc

1621 tgcgcggcat gaagcccgac ccgcccgtct acatacccaa cctgcaggag gagaccatac

1681 tcgcggagga acacagcaaa gtgtcatcac aacttaactt cgttctgatg ttggccgaac

1741 tgctgtcgga cttggccgtt tcttgcggag ctcccatcgc agccctgatg gatacgtccg

1801 atgagcgttg caacgagagc gtccggctgg gcctgatggt gcaggccatg caggcgctcg

1861 cggcgggcct gcgtctggcc gccacgcact accgcgcgcg cacgctgcag cccacgccgc

1921 aagtgcgcag cgttgtatcc ctgatgaacg gtaaatacaa atggatcgtc aacgagtcga

1981 agcgactgca cgaagcggga gtgacgccag ccgtctgcga taaaatactg tacgagcacg

2041 ctattgaact gtgtcagatg gcggccatcg aggaactgtt cggcgacacg aaggagtgcg

2101 agcgccgcta catgtcggcc caggtgctgc tgcactcgct cgtgcagaga cacccgctgc

2161 atccacacca ccggaccacg ctctccaaat atcgagacgc agtacaacgt agactaaact

2221 gtctcaaggg tgttcgcaaa ataatggatg tcaaaattga agccgggatc tcataatgc

//

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